RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SUPT20HL2P0C7V6 817 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 CCDC172P0C7W6 258 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 CDK4P11802 303 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 CKBP12277 381 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 CPT2P23786 658 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 GNL1P36915 607 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 CASP3P42574 277 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 PAFAH1B1P43034 410 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 CAPZA2P47755 286 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 DHPSP49366 369 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 ADCY7P51828 1080 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 ATXN3P54252 364 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 EIF4A1P60842 406 aaKnown RBP3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 YPEL5P62699 121 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 TRA2BP62995 288 aaKnown RBP3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 ATP8B2P98198 1209 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 ACY1Q03154 408 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 PRKCZQ05513 592 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 SCAPQ12770 1279 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 MYO1EQ12965 1108 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 TRDNQ13061 729 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 RIPK1Q13546 671 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 TRA2AQ13595 282 aaKnown RBP eCLIP3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 CAPSQ13938 189 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 MEP1BQ16820 701 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 KRT71Q3SY84 523 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 TIGD2Q4W5G0 525 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 HSP90AA5PQ58FG0 334 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 XKR9Q5GH70 373 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 NHSL2Q5HYW2 709 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 TMTC4Q5T4D3 741 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 ATXN7L2Q5T6C5 722 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 LINC00696Q6ZRV3 163 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 ESPNLQ6ZVH7 1005 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 LRRC8DQ7L1W4 858 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 CHST3Q7LGC8 479 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 ATG9AQ7Z3C6 839 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 MICU3Q86XE3 530 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 UNC5CLQ8IV45 518 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 WDR63Q8IWG1 891 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 C3orf20Q8ND61 904 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 SUPT20HQ8NEM7 779 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 TNIP2Q8NFZ5 429 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 NFKBIDQ8NI38 313 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 CPT1CQ8TCG5 803 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 AGR3Q8TD06 166 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 SCFD2Q8WU76 684 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 ASB15Q8WXK1 588 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 CASP10Q92851 521 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 LPPQ93052 612 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 LENG9Q96B70 501 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 FAM167AQ96KS9 214 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 SNX27Q96L92 541 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 BBC3Q96PG8 261 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 GCNAQ96QF7 691 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 GPHA2Q96T91 129 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 PKP4Q99569 1192 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 TBCDQ9BTW9 1192 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 UTP14AQ9BVJ6 771 aaKnown RBP3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 MAK16Q9BXY0 300 aaKnown RBP3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 TRIM54Q9BYV2 358 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 MAGEB5Q9BZ81 275 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 DPH1Q9BZG8 443 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 FAM129AQ9BZQ8 928 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 WNT8AQ9H1J5 351 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 MRPL46Q9H2W6 279 aaKnown RBP3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 TP63Q9H3D4 680 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 POFUT1Q9H488 388 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 SMURF2Q9HAU4 748 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 LTB4R2Q9NPC1 389 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 TRPV5Q9NQA5 729 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 POLE3Q9NRF9 147 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 ATAD3AQ9NVI7 634 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 QPCTLQ9NXS2 382 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 COX16Q9P0S2 106 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 SAE1Q9UBE0 346 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 DAPP1Q9UN19 280 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 SORCS3Q9UPU3 1222 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 WDR37Q9Y2I8 494 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 DERAQ9Y315 318 aa3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.79□□□□□ -1.8
HMGB1P12-201ENST00000438594 TTC41PQ6P2S7 1318 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 MROH5Q6ZUA9 1318 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 CTAGE15A4D2H0 777 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 LRRIQ4A6NIV6 560 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 C16orf96A6NNT2 1141 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 TMEM232C9JQI7 657 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 E7EVH7 732 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 H0YCG3 227 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 STX16-NPEPL1H3BU86 382 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 STX16O14662 325 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 PCDH17O14917 1159 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 WDR46O15213 610 aaKnown RBP3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 FOXP2O15409 715 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 KLK10O43240 276 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 KCNQ3O43525 872 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 DNPH1O43598 174 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZNF254O75437 659 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 PDE8BO95263 885 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms