RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 WDR5BQ86VZ2 330 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 LRRC8AQ8IWT6 810 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 RHOT1Q8IXI2 618 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 PRCCQ92733 491 aaPredicted RBP15.88■□□□□ 0.13
TREX1-201ENST00000433541 ARHGEF2Q92974 986 aaKnown RBP15.88■□□□□ 0.13
TREX1-201ENST00000433541 ALG14Q96F25 216 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 MRGPRX3Q96LB0 322 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 CCDC114Q96M63 670 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 PSMB7Q99436 277 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 SLC6A17Q9H1V8 727 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 TMEM245Q9H330 911 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 MTG2Q9H4K7 406 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 PRDM16Q9HAZ2 1276 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 INVSQ9Y283 1065 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 REXO2Q9Y3B8 237 aaKnown RBP15.88■□□□□ 0.13
TREX1-201ENST00000433541 FARP1Q9Y4F1 1045 aaPredicted RBP15.88■□□□□ 0.13
TREX1-201ENST00000433541 CACNA1HO95180 2353 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 THADAQ6YHU6 1953 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 RCCD1A6NED2 376 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 ARHGAP42A6NI28 874 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 RASA4BC9J798 803 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 MAP3K13O43283 966 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 RASA4O43374 803 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 RPP40O75818 363 aaKnown RBP15.87■□□□□ 0.13
TREX1-201ENST00000433541 TDGF1P13385 188 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 NDUFV2P19404 249 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 AMPD1P23109 780 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 HOXA6P31267 233 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 RECQLP46063 649 aaPredicted RBP15.87■□□□□ 0.13
TREX1-201ENST00000433541 GEMIN4P57678 1058 aaKnown RBP15.87■□□□□ 0.13
TREX1-201ENST00000433541 MMRN1Q13201 1228 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 SRSF5Q13243 272 aaKnown RBP15.87■□□□□ 0.13
TREX1-201ENST00000433541 PDK2Q15119 407 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 HNRNPA1L2Q32P51 320 aaKnown RBP15.87■□□□□ 0.13
TREX1-201ENST00000433541 PARP15Q460N3 678 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 ATP13A4Q4VNC1 1196 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 LEKR1Q6ZMV7 388 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 POLNQ7Z5Q5 900 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 TMPRSS6Q8IU80 811 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 OR2T3Q8NH03 318 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.87■□□□□ 0.13
TREX1-201ENST00000433541 GANCQ8TET4 914 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 SIPA1Q96FS4 1042 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 CSPG4P5Q96PW8 444 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 GOLPH3Q9H4A6 298 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 ZNF212Q9UDV6 495 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 EBF1Q9UH73 591 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 OR51B4Q9Y5P0 310 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 CEP192Q8TEP8 1941 aa15.87■□□□□ 0.13
TREX1-201ENST00000433541 CCDC163A0A0D9SF12 145 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 WASH4PA8MWX3 477 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 SIN3BO75182 1162 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 DNTTP04053 509 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 SERPINB6P35237 376 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 HCAR3P49019 387 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 NDST2P52849 883 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 HADHBP55084 474 aaKnown RBP15.86■□□□□ 0.13
TREX1-201ENST00000433541 YBEYP58557 167 aaPredicted RBP15.86■□□□□ 0.13
TREX1-201ENST00000433541 NHLH1Q02575 133 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 CAMK2GQ13555 558 aaPredicted RBP15.86■□□□□ 0.13
TREX1-201ENST00000433541 ENPP2Q13822 863 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 BYSLQ13895 437 aaKnown RBP15.86■□□□□ 0.13
TREX1-201ENST00000433541 SIM2Q14190 667 aaPredicted RBP15.86■□□□□ 0.13
TREX1-201ENST00000433541 TCEAL1Q15170 157 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 DLG2Q15700 870 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 Q6ZVU0 165 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 RASSF3Q86WH2 238 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 RYBPQ8N488 228 aaPredicted RBP15.86■□□□□ 0.13
TREX1-201ENST00000433541 SH2D3CQ8N5H7 860 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 KDM1BQ8NB78 822 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 RLN3Q8WXF3 142 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 HMCESQ96FZ2 354 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 CALR3Q96L12 384 aaKnown RBP15.86■□□□□ 0.13
TREX1-201ENST00000433541 MAK16Q9BXY0 300 aaKnown RBP15.86■□□□□ 0.13
TREX1-201ENST00000433541 TSGA10Q9BZW7 698 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 LACRTQ9GZZ8 138 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 FBRSQ9HAH7 460 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 SP110Q9HB58 689 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 PRSS16Q9NQE7 514 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 DDX56Q9NY93 547 aaKnown RBP15.86■□□□□ 0.13
TREX1-201ENST00000433541 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.86■□□□□ 0.13
TREX1-201ENST00000433541 ALG6Q9Y672 507 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 DUSP10Q9Y6W6 482 aa15.86■□□□□ 0.13
TREX1-201ENST00000433541 ZSCAN5CA6NGD5 496 aaPredicted RBP15.85■□□□□ 0.13
TREX1-201ENST00000433541 K7ERQ8 282 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 KRT86O43790 486 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 MT-CO1P00395 513 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 CD48P09326 243 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 CCDC175P0C221 793 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 SRCP12931 536 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 VAV1P15498 845 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 CNR2P34972 360 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 DPYSQ14117 519 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 DPYSL3Q14195 570 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 LPAL2Q16609 132 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 TTC31Q49AM3 519 aaPredicted RBP15.85■□□□□ 0.13
TREX1-201ENST00000433541 ARTNQ5T4W7 220 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 ZNF776Q68DI1 518 aaPredicted RBP15.85■□□□□ 0.13
TREX1-201ENST00000433541 C11orf63Q6NUN7 778 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 C22orf39Q6P5X5 142 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms