RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 CLDN11O75508 207 aa19.14■□□□□ 0.65
AC004540.1-202ENST00000430548 FGFR1OPO95684 399 aaKnown RBP19.14■□□□□ 0.65
AC004540.1-202ENST00000430548 SLC9A1P19634 815 aa19.14■□□□□ 0.65
AC004540.1-202ENST00000430548 CNTN1Q12860 1018 aa19.14■□□□□ 0.65
AC004540.1-202ENST00000430548 ILKQ13418 452 aa19.14■□□□□ 0.65
AC004540.1-202ENST00000430548 Q6ZVU0 165 aa19.14■□□□□ 0.65
AC004540.1-202ENST00000430548 PRPF39Q86UA1 669 aaKnown RBP19.14■□□□□ 0.65
AC004540.1-202ENST00000430548 TMEM145Q8NBT3 493 aa19.14■□□□□ 0.65
AC004540.1-202ENST00000430548 C1orf131Q8NDD1 294 aaKnown RBP19.14■□□□□ 0.65
AC004540.1-202ENST00000430548 ZNF397Q8NF99 534 aaPredicted RBP19.14■□□□□ 0.65
AC004540.1-202ENST00000430548 PIP4K2CQ8TBX8 421 aa19.14■□□□□ 0.65
AC004540.1-202ENST00000430548 RFFLQ8WZ73 363 aa19.14■□□□□ 0.65
AC004540.1-202ENST00000430548 PREBQ9HCU5 417 aa19.14■□□□□ 0.65
AC004540.1-202ENST00000430548 VANGL2Q9ULK5 521 aa19.14■□□□□ 0.65
AC004540.1-202ENST00000430548 BPTFQ12830 3046 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 SYNJ2BP-COX16A0A087WUM0 186 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 MAGEC1O60732 1142 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 ERBB2P04626 1255 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 GGCXP38435 758 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 CLDN6P56747 220 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 TAS2R38P59533 333 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 APBA1Q02410 837 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 BNIP3Q12983 259 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 DLG2Q15700 870 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 PTPN20Q4JDL3 420 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 SETMARQ53H47 684 aaPredicted RBP19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 C6orf118Q5T5N4 469 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 PIP5KL1Q5T9C9 394 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 HES3Q5TGS1 186 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 C11orf57Q6ZUT1 292 aaPredicted RBP19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 PASD1Q8IV76 773 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 ZNF683Q8IZ20 524 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 CACTIN-AS1Q8N1I8 211 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 LRIG1Q96JA1 1093 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 COX16Q9P0S2 106 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 RWDD2AQ9UIY3 292 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 VPS28Q9UK41 221 aa19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 AJAP1Q9UKB5 411 aaPredicted RBP19.13■□□□□ 0.65
AC004540.1-202ENST00000430548 I6L893 689 aaPredicted RBP19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 PAGE1O75459 146 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 GRAP2O75791 330 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 CTSLP07711 333 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 SRCP12931 536 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 CDH4P55283 916 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 BECN1Q14457 450 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 RTP5Q14D33 572 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 ARHGAP44Q17R89 818 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 PROX2Q3B8N5 592 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 GBP6Q6ZN66 633 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 NOX5Q96PH1 765 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 PSMB7Q99436 277 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 NRSN2Q9GZP1 204 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 SIX2Q9NPC8 291 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 PIGVQ9NUD9 493 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 ARHGEF38Q9NXL2 777 aa19.12■□□□□ 0.65
AC004540.1-202ENST00000430548 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 PRAMEF26H0Y7S4 382 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 RNGTTO60942 597 aaKnown RBP19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 GADD45BO75293 160 aaPredicted RBP19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 ACP1P24666 158 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 PON1P27169 355 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 MAT2AP31153 395 aaKnown RBP19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 NOS2P35228 1153 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 ABCG1P45844 678 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 SLC6A3Q01959 620 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 NME3Q13232 169 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 ZNF177Q13360 481 aaPredicted RBP19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 EXOC3L4Q17RC7 722 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 BRMS1LQ5PSV4 323 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 C14orf80Q86SX3 495 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 IRF2BP1Q8IU81 584 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 RNF34Q969K3 372 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 NT5C3BQ969T7 300 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 PGAP3Q96FM1 320 aaPredicted RBP19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 CRELD1Q96HD1 420 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 NPY6RQ99463 290 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 ANLNQ9NQW6 1124 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 RRN3Q9NYV6 651 aa19.11■□□□□ 0.65
AC004540.1-202ENST00000430548 M0QYT0 321 aa19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 TLX3O43711 291 aaPredicted RBP19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 JUPP14923 745 aa19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 CKMT2P17540 419 aa19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 USP8P40818 1118 aa19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 CXCR3P49682 368 aa19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 TARDBPQ13148 414 aaKnown RBP eCLIP19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 ACCSLQ4AC99 568 aa19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 ALFQ53S48 1182 aa19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 ARTNQ5T4W7 220 aa19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 OR6B2Q6IFH4 312 aa19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 NEK5Q6P3R8 708 aa19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 ZDHHC17Q8IUH5 632 aa19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 DCAF4L2Q8NA75 395 aa19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 OR2A12Q8NGT7 310 aa19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 VPS51Q9UID3 782 aa19.1■□□□□ 0.65
AC004540.1-202ENST00000430548 CNTN5O94779 1100 aa19.09■□□□□ 0.65
AC004540.1-202ENST00000430548 ADCY5O95622 1261 aa19.09■□□□□ 0.65
AC004540.1-202ENST00000430548 TFE3P19532 575 aaPredicted RBP19.09■□□□□ 0.65
AC004540.1-202ENST00000430548 CDH5P33151 784 aaPredicted RBP19.09■□□□□ 0.65
AC004540.1-202ENST00000430548 CLCN1P35523 988 aa19.09■□□□□ 0.65
AC004540.1-202ENST00000430548 SCNN1AP37088 669 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms