RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 SREK1Q8WXA9 508 aaKnown RBP12.72□□□□□ -0.37
CDH3-202ENST00000429102 TMIGD2Q96BF3 282 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 LENG1Q96BZ8 264 aaPredicted RBP12.72□□□□□ -0.37
CDH3-202ENST00000429102 WDR41Q9HAD4 459 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 PRM3Q9NNZ6 103 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 PNPLA8Q9NP80 782 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 DDIT4Q9NX09 232 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 ERAP1Q9NZ08 941 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 GIMAP2Q9UG22 337 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 PIN4Q9Y237 131 aaKnown RBP12.72□□□□□ -0.37
CDH3-202ENST00000429102 C9IYK1 514 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 NFKBIEO00221 500 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 GPC4O75487 556 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 CRTAMO95727 393 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 CKMT2P17540 419 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 TKTP29401 623 aaKnown RBP12.71□□□□□ -0.37
CDH3-202ENST00000429102 EPHX2P34913 555 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 INHBCP55103 352 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 GJA9P57773 515 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 TPI1P60174 286 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 CDKL1Q00532 357 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 PLIN5Q00G26 463 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 MAP3K10Q02779 954 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 CSHL1Q14406 222 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 R3HDM1Q15032 1099 aaKnown RBP12.71□□□□□ -0.37
CDH3-202ENST00000429102 OR9I1Q8NGQ6 314 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 HASPINQ8TF76 798 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 VPS39Q96JC1 886 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 CIB1Q99828 191 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 DMAP1Q9NPF5 467 aaPredicted RBP12.71□□□□□ -0.37
CDH3-202ENST00000429102 XPR1Q9UBH6 696 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.71□□□□□ -0.37
CDH3-202ENST00000429102 IGKV6D-21A0A0A0MT36 114 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 SPTLC1O15269 473 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 USP17L7P0C7H9 530 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 ARL1P40616 181 aaPredicted RBP12.71□□□□□ -0.37
CDH3-202ENST00000429102 CEACAM7Q14002 265 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 RARS2Q5T160 578 aaKnown RBP12.71□□□□□ -0.37
CDH3-202ENST00000429102 LRRC8EQ6NSJ5 796 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 NXNL1Q96CM4 212 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 ZNF512Q96ME7 567 aaPredicted RBP12.71□□□□□ -0.37
CDH3-202ENST00000429102 TMEM165Q9HC07 324 aa12.71□□□□□ -0.37
CDH3-202ENST00000429102 RBBP6Q7Z6E9 1792 aaKnown RBP12.71□□□□□ -0.38
CDH3-202ENST00000429102 SAC3D1A6NKF1 404 aa12.71□□□□□ -0.38
CDH3-202ENST00000429102 RECQL4O94761 1208 aa12.71□□□□□ -0.38
CDH3-202ENST00000429102 CLIC3O95833 236 aa12.71□□□□□ -0.38
CDH3-202ENST00000429102 PRKCGP05129 697 aa12.71□□□□□ -0.38
CDH3-202ENST00000429102 UGT1A6P19224 532 aa12.71□□□□□ -0.38
CDH3-202ENST00000429102 GRK2P25098 689 aa12.71□□□□□ -0.38
CDH3-202ENST00000429102 PDAP1Q13442 181 aaKnown RBP12.71□□□□□ -0.38
CDH3-202ENST00000429102 KRT80Q6KB66 452 aa12.71□□□□□ -0.38
CDH3-202ENST00000429102 ACTRT2Q8TDY3 377 aa12.71□□□□□ -0.38
CDH3-202ENST00000429102 ELMO2Q96JJ3 720 aa12.71□□□□□ -0.38
CDH3-202ENST00000429102 QKIQ96PU8 341 aaKnown RBP eCLIP12.71□□□□□ -0.38
CDH3-202ENST00000429102 CYP3A43Q9HB55 503 aa12.71□□□□□ -0.38
CDH3-202ENST00000429102 PIGVQ9NUD9 493 aa12.71□□□□□ -0.38
CDH3-202ENST00000429102 GALNT8Q9NY28 637 aa12.71□□□□□ -0.38
CDH3-202ENST00000429102 LTBP1Q14766 1721 aa12.71□□□□□ -0.38
CDH3-202ENST00000429102 COL11A2P13942 1736 aaPredicted RBP12.7□□□□□ -0.38
CDH3-202ENST00000429102 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.7□□□□□ -0.38
CDH3-202ENST00000429102 LGALS2P05162 132 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 ICAM3P32942 547 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 SEMA5AQ13591 1074 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 PPP1R3AQ16821 1122 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 MTX3Q5HYI7 312 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 IL23RQ5VWK5 629 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 LILRA2Q8N149 483 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 FAM110BQ8TC76 370 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 LRRC39Q96DD0 335 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 ZBED3Q96IU2 234 aaPredicted RBP12.7□□□□□ -0.38
CDH3-202ENST00000429102 ZFP42Q96MM3 310 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 OLFM3Q96PB7 478 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 TRPC7Q9HCX4 862 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 C22orf31O95567 290 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 STAMBPO95630 424 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 HNRNPCP07910 306 aaKnown RBP eCLIP12.7□□□□□ -0.38
CDH3-202ENST00000429102 TSHRP16473 764 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 SLC12A2P55011 1212 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 CDH13P55290 713 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 AGKQ53H12 422 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 LRTOMTQ8WZ04 291 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 SLC2A6Q9UGQ3 507 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 ITGA11Q9UKX5 1188 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 TDRKHQ9Y2W6 561 aaKnown RBP12.7□□□□□ -0.38
CDH3-202ENST00000429102 SF3B1O75533 1304 aaKnown RBP eCLIP12.7□□□□□ -0.38
CDH3-202ENST00000429102 KPNA7A9QM74 516 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 AURKAO14965 403 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 PROZP22891 400 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 PCSK6P29122 969 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 DPP6P42658 865 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 CHRNA4P43681 627 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 TKTL1P51854 596 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 OAZ1P54368 228 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 TNFAIP2Q03169 654 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 PTK2BQ14289 1009 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 TTLL4Q14679 1199 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 PRAMEF19Q5SWL8 479 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 LRRC8BQ6P9F7 803 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 ARHGAP36Q6ZRI8 547 aa12.7□□□□□ -0.38
CDH3-202ENST00000429102 MTMR14Q8NCE2 650 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms