RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 NNMTP40261 264 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 GABRB2P47870 512 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 SULT1E1P49888 294 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 CLDN6P56747 220 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 TAS2R38P59533 333 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 CNTN1Q12860 1018 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 SFSWAPQ12872 951 aaKnown RBP15.94■□□□□ 0.14
SEC13-210ENST00000428626 ZNF177Q13360 481 aaPredicted RBP15.94■□□□□ 0.14
SEC13-210ENST00000428626 CAMK2BQ13554 666 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 RAPGEF1Q13905 1077 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 TPD52L1Q16890 204 aaPredicted RBP15.94■□□□□ 0.14
SEC13-210ENST00000428626 ACCSLQ4AC99 568 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 RAB6CQ53S08 254 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 KLHDC7AQ5VTJ3 777 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 TAF3Q5VWG9 929 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 TBC1D3GQ6DHY5 549 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 SMYD5Q6GMV2 418 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 TBC1D3CQ6IPX1 549 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 NOP9Q86U38 636 aaKnown RBP15.94■□□□□ 0.14
SEC13-210ENST00000428626 TBC1D3Q8IZP1 549 aaPredicted RBP15.94■□□□□ 0.14
SEC13-210ENST00000428626 SH2D3CQ8N5H7 860 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 PIP4K2CQ8TBX8 421 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 SAP25Q8TEE9 199 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 SERAC1Q96JX3 654 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 RAB6CQ9H0N0 254 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 SYNCQ9H7C4 482 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 CAAP1Q9H8G2 361 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.94■□□□□ 0.14
SEC13-210ENST00000428626 VPS28Q9UK41 221 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 CA5BQ9Y2D0 317 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 COL5A1P20908 1838 aaPredicted RBP15.94■□□□□ 0.14
SEC13-210ENST00000428626 URB1O60287 2271 aaKnown RBP15.93■□□□□ 0.14
SEC13-210ENST00000428626 A0A0D9SEW6 157 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 DRGXA6NNA5 263 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 MCF2LO15068 1137 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 SMAD6O43541 496 aaKnown RBP15.93■□□□□ 0.14
SEC13-210ENST00000428626 PLRG1O43660 514 aaKnown RBP15.93■□□□□ 0.14
SEC13-210ENST00000428626 GLDCP23378 1020 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 CDH4P55283 916 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 OXCT1P55809 520 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 NXPH1P58417 271 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 BNIP3Q12983 259 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 CCDC157Q569K6 752 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 DHRS13Q6UX07 377 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 BNIPLQ7Z465 357 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 TMEM35BQ8NCS4 154 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 OR8D1Q8WZ84 308 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 PGAP3Q96FM1 320 aaPredicted RBP15.93■□□□□ 0.14
SEC13-210ENST00000428626 WDCPQ9H6R7 721 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 MPP6Q9NZW5 540 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 CHMP5Q9NZZ3 219 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 ZNF212Q9UDV6 495 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 VPS51Q9UID3 782 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 SLC25A13Q9UJS0 675 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 HS3ST2Q9Y278 367 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 ADAMTS20P59510 1910 aa15.93■□□□□ 0.14
SEC13-210ENST00000428626 TLR4O00206 839 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 BNIP3LO60238 219 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 DFNA5O60443 496 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 UCHL3P15374 230 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 RRM1P23921 792 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 ERCC5P28715 1186 aaPredicted RBP15.92■□□□□ 0.14
SEC13-210ENST00000428626 DNAJC3Q13217 504 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 SMAD1Q15797 465 aaKnown RBP15.92■□□□□ 0.14
SEC13-210ENST00000428626 BRMS1LQ5PSV4 323 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 FAM102AQ5T9C2 384 aaPredicted RBP15.92■□□□□ 0.14
SEC13-210ENST00000428626 PIP5KL1Q5T9C9 394 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 NAPEPLDQ6IQ20 393 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 LINGO4Q6UY18 593 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 KANSL1Q7Z3B3 1105 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 TFAP2DQ7Z6R9 452 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 ZDHHC17Q8IUH5 632 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 OR2A12Q8NGT7 310 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 ARRDC3Q96B67 414 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 C18orf8Q96DM3 657 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 MUC3BQ9H195 1237 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 CCDC86Q9H6F5 360 aaKnown RBP15.92■□□□□ 0.14
SEC13-210ENST00000428626 FTSJ1Q9UET6 329 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 TMEM59LQ9UK28 342 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 GPSM3Q9Y4H4 160 aa15.92■□□□□ 0.14
SEC13-210ENST00000428626 IGLV3-10A0A075B6K4 115 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 SLC7A4O43246 635 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 RHOCP08134 193 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 MMEP08473 750 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 EPHA8P29322 1005 aaPredicted RBP15.91■□□□□ 0.14
SEC13-210ENST00000428626 SCNN1AP37088 669 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 KLK7P49862 253 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 BPIFB4P59827 614 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 DEUP1Q05D60 604 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 SLC25A52Q3SY17 297 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 C19orf48Q6RUI8 117 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 LRSAM1Q6UWE0 723 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 ERICH1Q86X53 443 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 FAM114A1Q8IWE2 563 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 CHST14Q8NCH0 376 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 OR7D4Q8NG98 312 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 EPS8L1Q8TE68 723 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 SLC20A1Q8WUM9 679 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 CPA5Q8WXQ8 436 aa15.91■□□□□ 0.14
SEC13-210ENST00000428626 CFAP57Q96MR6 1250 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms