RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 SUN5Q8TC36 379 aa16.37■□□□□ 0.21
C9orf3-206ENST00000428313 TMA16Q96EY4 203 aaKnown RBP16.37■□□□□ 0.21
C9orf3-206ENST00000428313 EBNA1BP2Q99848 306 aaKnown RBP16.37■□□□□ 0.21
C9orf3-206ENST00000428313 LXNQ9BS40 222 aa16.37■□□□□ 0.21
C9orf3-206ENST00000428313 WDR18Q9BV38 432 aa16.37■□□□□ 0.21
C9orf3-206ENST00000428313 WDR11Q9BZH6 1224 aa16.37■□□□□ 0.21
C9orf3-206ENST00000428313 UNC93B1Q9H1C4 597 aa16.37■□□□□ 0.21
C9orf3-206ENST00000428313 RAB6BQ9NRW1 208 aa16.37■□□□□ 0.21
C9orf3-206ENST00000428313 ADA2Q9NZK5 511 aa16.37■□□□□ 0.21
C9orf3-206ENST00000428313 SLC9A2Q9UBY0 812 aa16.37■□□□□ 0.21
C9orf3-206ENST00000428313 A8MU76 341 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 TRIM24O15164 1050 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 GAS7O60861 476 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 MBL2P11226 248 aaPredicted RBP16.36■□□□□ 0.21
C9orf3-206ENST00000428313 MAGEA3P43357 314 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 RHBDL3P58872 404 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 MPP1Q00013 466 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 FSTL1Q12841 308 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 NOMO1Q15155 1222 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 HADHQ16836 314 aaKnown RBP16.36■□□□□ 0.21
C9orf3-206ENST00000428313 PGS1Q32NB8 556 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 SLC27A3Q5K4L6 730 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 IQSEC1Q6DN90 963 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 SPATA18Q8TC71 538 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 PPWD1Q96BP3 646 aaKnown RBP16.36■□□□□ 0.21
C9orf3-206ENST00000428313 MAGED4Q96JG8 741 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 C17orf80Q9BSJ5 609 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 CYP26B1Q9NR63 512 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 MOCS1Q9NZB8 636 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 PKD2L2Q9NZM6 624 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 SLC27A5Q9Y2P5 690 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 PCDHGA7Q9Y5G6 932 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 N6AMT1Q9Y5N5 214 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 GOLGA8QA0A0J9YX86 632 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 A0A1W2PQ67 120 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 HEATR9A2RTY3 570 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 GOLGA8OA6NCC3 632 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 TCAF2A6NFQ2 919 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 TBKBP1A7MCY6 615 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 GOLGA8NF8WBI6 632 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 HDAC3O15379 428 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 TPPPO94811 219 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 SEC24DO94855 1032 aaPredicted RBP16.36■□□□□ 0.21
C9orf3-206ENST00000428313 SERPINB1P30740 379 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 TUBA1BP68363 451 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 IGBP1P78318 339 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 TNK2Q07912 1038 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 C4orf22Q6V702 233 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 TUBA1AQ71U36 451 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 PTAR1Q7Z6K3 402 aaPredicted RBP16.36■□□□□ 0.21
C9orf3-206ENST00000428313 DSG4Q86SJ6 1040 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 KIAA2013Q8IYS2 634 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 CBR4Q8N4T8 237 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 SNX19Q92543 992 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 LPGAT1Q92604 370 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 RTP4Q96DX8 246 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 SP140LQ9H930 580 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 SARDHQ9UL12 918 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 CNTN6Q9UQ52 1028 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 PCDHGA3Q9Y5H0 932 aa16.36■□□□□ 0.21
C9orf3-206ENST00000428313 ARID2Q68CP9 1835 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 LSM8O95777 96 aaKnown RBP16.35■□□□□ 0.21
C9orf3-206ENST00000428313 HSPA1AP0DMV8 641 aaKnown RBP16.35■□□□□ 0.21
C9orf3-206ENST00000428313 HSPA1BP0DMV9 641 aaKnown RBP16.35■□□□□ 0.21
C9orf3-206ENST00000428313 RAD23AP54725 363 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 IFITM3Q01628 133 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 NAB1Q13506 487 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 LRIT3Q3SXY7 679 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 CCNYL2Q5T2Q4 361 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 GTF2IRD2BQ6EKJ0 949 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 UGT3A1Q6NUS8 523 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 TFAP2DQ7Z6R9 452 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 GTF2IRD2Q86UP8 949 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 DCAF4Q8WV16 495 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 SIGLEC10Q96LC7 697 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 BEGAINQ9BUH8 593 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 C9orf16Q9BUW7 83 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 RNF38Q9H0F5 515 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 ATP13A3Q9H7F0 1226 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 XPNPEP3Q9NQH7 507 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 TMEM216Q9P0N5 145 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 TBC1D14Q9P2M4 693 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 ANGPTL3Q9Y5C1 460 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 PCDHB4Q9Y5E5 795 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 ACOX3O15254 700 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 DEAF1O75398 565 aaPredicted RBP16.35■□□□□ 0.21
C9orf3-206ENST00000428313 IL18RAPO95256 599 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 UBL4AP11441 157 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 KRT3P12035 628 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 NRLP54845 237 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 TRIM32Q13049 653 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 ITPK1Q13572 414 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 KIAA0408Q6ZU52 694 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 UNC5BQ8IZJ1 945 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 CHAC2Q8WUX2 184 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 ILKAPQ9H0C8 392 aaPredicted RBP16.35■□□□□ 0.21
C9orf3-206ENST00000428313 PCDHAC1Q9H158 963 aa16.35■□□□□ 0.21
C9orf3-206ENST00000428313 RBAKQ9NYW8 714 aaPredicted RBP16.35■□□□□ 0.21
C9orf3-206ENST00000428313 WDR64B1ANS9 1081 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 PHGDHO43175 533 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms