RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 FAM172AQ8WUF8 416 aa18.89■□□□□ 0.61
GPC1-205ENST00000427506 CCDC114Q96M63 670 aa18.89■□□□□ 0.61
GPC1-205ENST00000427506 CNTNAP3BQ96NU0 1288 aa18.89■□□□□ 0.61
GPC1-205ENST00000427506 PSMB7Q99436 277 aa18.89■□□□□ 0.61
GPC1-205ENST00000427506 CNTNAP3Q9BZ76 1288 aa18.89■□□□□ 0.61
GPC1-205ENST00000427506 GAREM1Q9H706 876 aa18.89■□□□□ 0.61
GPC1-205ENST00000427506 OR12D3Q9UGF7 316 aa18.89■□□□□ 0.61
GPC1-205ENST00000427506 VPS51Q9UID3 782 aa18.89■□□□□ 0.61
GPC1-205ENST00000427506 SLCO1B1Q9Y6L6 691 aa18.89■□□□□ 0.61
GPC1-205ENST00000427506 PI4KAP42356 2102 aa18.89■□□□□ 0.61
GPC1-205ENST00000427506 SPTBN2O15020 2390 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 TBC1D3DA0A087WVF3 549 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 TBC1D3IA0A087WXS9 549 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 TBC1D3EA0A087X179 549 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 TBC1D3KA0A087X1G2 549 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 TBC1D3FA6NER0 549 aaPredicted RBP18.88■□□□□ 0.61
GPC1-205ENST00000427506 TBC1D3LB9A6J9 549 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 C1QTNF3-AMACRE9PGA6 284 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 MT-CO1P00395 513 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 SERPINC1P01008 464 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 IGHV4-34P06331 123 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 TBC1D3HP0C7X1 549 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 CD59P13987 128 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 TNFAIP3P21580 790 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 GSCP56915 257 aaPredicted RBP18.88■□□□□ 0.61
GPC1-205ENST00000427506 C1QBPQ07021 282 aaKnown RBP18.88■□□□□ 0.61
GPC1-205ENST00000427506 FOXC1Q12948 553 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 TBC1D3GQ6DHY5 549 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 TBC1D3CQ6IPX1 549 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 RWDD4Q6NW29 188 aaKnown RBP18.88■□□□□ 0.61
GPC1-205ENST00000427506 WDR59Q6PJI9 974 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 LINGO4Q6UY18 593 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 MON1BQ7L1V2 547 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 DRC7Q8IY82 874 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 TBC1D3Q8IZP1 549 aaPredicted RBP18.88■□□□□ 0.61
GPC1-205ENST00000427506 DCAF4L2Q8NA75 395 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 OR7D4Q8NG98 312 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 OSGEPQ9NPF4 335 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 PPARGC1AQ9UBK2 798 aaKnown RBP18.88■□□□□ 0.61
GPC1-205ENST00000427506 MYO6Q9UM54 1294 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 HS3ST2Q9Y278 367 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 LAMA1P25391 3075 aa18.88■□□□□ 0.61
GPC1-205ENST00000427506 ILVBLA1L0T0 632 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 SYCE3A1L190 88 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 LRRC53A6NM62 1247 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 SIGLEC16A6NMB1 481 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 K7ERQ8 282 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 CBX4O00257 560 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 MCF2LO15068 1137 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 ALOX15BO15296 676 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 GJB3O75712 270 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 RRM1P23921 792 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 ADPRHP54922 357 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 TPM4P67936 248 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 SIM1P81133 766 aaPredicted RBP18.87■□□□□ 0.61
GPC1-205ENST00000427506 BNC1Q01954 994 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 HLA-BQ31612 363 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 POM121L1PQ3SYA9 428 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 ACAD10Q6JQN1 1059 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 SCYL2Q6P3W7 929 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 ZNF783Q6ZMS7 281 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 IRF2BP2Q7Z5L9 587 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 PIP4K2CQ8TBX8 421 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 OSBPL2Q9H1P3 480 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 IL21RQ9HBE5 538 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 ATP13A1Q9HD20 1204 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 SARDHQ9UL12 918 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 PCDHB9Q9Y5E1 797 aa18.87■□□□□ 0.61
GPC1-205ENST00000427506 SPAARA0A1B0GVQ0 90 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 A0A1W2PPC4 97 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 TMCO5BA8MYB1 307 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 PLK4O00444 970 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 SH3BP5O60239 455 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 DESP17661 470 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 GLDCP23378 1020 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 DRD3P35462 400 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 RECQLP46063 649 aaPredicted RBP18.86■□□□□ 0.61
GPC1-205ENST00000427506 GRIA4P48058 902 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 METAP1P53582 386 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 HDAC4P56524 1084 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 C21orf59P57076 290 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 GNA12Q03113 381 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 ASIC2Q16515 512 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 KIF19Q2TAC6 998 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 KLHL40Q2TBA0 621 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 RETSATQ6NUM9 610 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 DCUN1D2Q6PH85 259 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 LAYNQ6UX15 382 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 NAXDQ8IW45 347 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 CCDC185Q8N715 623 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 BAP1Q92560 729 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 CENPIQ92674 756 aaPredicted RBP18.86■□□□□ 0.61
GPC1-205ENST00000427506 MCEEQ96PE7 176 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 TM7SF3Q9NS93 570 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 PPM1HQ9ULR3 514 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 ANKRD6Q9Y2G4 727 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 SNX11Q9Y5W9 270 aa18.86■□□□□ 0.61
GPC1-205ENST00000427506 A0A1W2PQC6 194 aa18.85■□□□□ 0.61
GPC1-205ENST00000427506 SMAD6O43541 496 aaKnown RBP18.85■□□□□ 0.61
GPC1-205ENST00000427506 RTN2O75298 545 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms