RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 IDH3AP50213 366 aa11.85□□□□□ -0.51
FIRRE-201ENST00000427391 LIMK2P53671 638 aa11.85□□□□□ -0.51
FIRRE-201ENST00000427391 GJA9P57773 515 aa11.85□□□□□ -0.51
FIRRE-201ENST00000427391 GRM3Q14832 879 aa11.85□□□□□ -0.51
FIRRE-201ENST00000427391 ARL13BQ3SXY8 428 aa11.85□□□□□ -0.51
FIRRE-201ENST00000427391 WDR75Q8IWA0 830 aaKnown RBP11.85□□□□□ -0.51
FIRRE-201ENST00000427391 PHTF2Q8N3S3 785 aa11.85□□□□□ -0.51
FIRRE-201ENST00000427391 IPMKQ8NFU5 416 aa11.85□□□□□ -0.51
FIRRE-201ENST00000427391 MAPK15Q8TD08 544 aa11.85□□□□□ -0.51
FIRRE-201ENST00000427391 TEKT5Q96M29 485 aa11.85□□□□□ -0.51
FIRRE-201ENST00000427391 TUBB6Q9BUF5 446 aa11.85□□□□□ -0.51
FIRRE-201ENST00000427391 CYP4F11Q9HBI6 524 aa11.85□□□□□ -0.51
FIRRE-201ENST00000427391 MPP6Q9NZW5 540 aa11.85□□□□□ -0.51
FIRRE-201ENST00000427391 SIN3BO75182 1162 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 CHRNGP07510 517 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 SERPINA6P08185 405 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 MPP3Q13368 585 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 RABGAP1LQ5R372 815 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 SNX30Q5VWJ9 437 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 PDZD4Q76G19 769 aaPredicted RBP11.84□□□□□ -0.51
FIRRE-201ENST00000427391 ARMCX6Q7L4S7 300 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 DENND6AQ8IWF6 608 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 ULK2Q8IYT8 1036 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 TMEM86AQ8N2M4 240 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 URGCPQ8TCY9 931 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 HDAC11Q96DB2 347 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 VPS39Q96JC1 886 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 PANX3Q96QZ0 392 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 NAT9Q9BTE0 207 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 FTHL17Q9BXU8 183 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 SLC2A6Q9UGQ3 507 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 SLC7A8Q9UHI5 535 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 PACSIN3Q9UKS6 424 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 TRPM7Q96QT4 1865 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 GOLGA8QA0A0J9YX86 632 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 GOLGA8OA6NCC3 632 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 E9PBE3 544 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 GOLGA8NF8WBI6 632 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 G3V2L1 256 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 ZNF195O14628 629 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 KLHL41O60662 606 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 USP1O94782 785 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 AKR1A1P14550 325 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 SPRP35270 261 aaPredicted RBP11.84□□□□□ -0.51
FIRRE-201ENST00000427391 CHRNA4P43681 627 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 CCNG1P51959 295 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 ABCE1P61221 599 aaKnown RBP11.84□□□□□ -0.51
FIRRE-201ENST00000427391 CTBP1Q13363 440 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 GRTP1Q5TC63 336 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 ZNF280DQ6N043 979 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 C17orf99Q6UX52 265 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 RIPOR1Q6ZS17 1223 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 TMPRSS6Q8IU80 811 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 CCNJLQ8IV13 435 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 NEU3Q9UQ49 428 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 LAMA3Q16787 3333 aa11.84□□□□□ -0.51
FIRRE-201ENST00000427391 KIF3CO14782 793 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 PMPCBO75439 489 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 PDE5AO76074 875 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 GABRB3P28472 473 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 PCSK1P29120 753 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 FKBP1BP68106 108 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 MPP1Q00013 466 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 SLC9B1Q4ZJI4 515 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 RAPH1Q70E73 1250 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 ARHGAP12Q8IWW6 846 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 SCUBE1Q8IWY4 988 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.83□□□□□ -0.51
FIRRE-201ENST00000427391 DPF3Q92784 378 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 CASP10Q92851 521 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 ADAM2Q99965 735 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 OSBPL1AQ9BXW6 950 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 GABRQQ9UN88 632 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 APOBEC2Q9Y235 224 aaKnown RBP11.83□□□□□ -0.51
FIRRE-201ENST00000427391 LRRC42Q9Y546 428 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 PTCH2Q9Y6C5 1203 aa11.83□□□□□ -0.51
FIRRE-201ENST00000427391 UNCXA6NJT0 531 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 PAGE1O75459 146 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 CPOXP36551 454 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 SERPINB8P50452 374 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 EPHB1P54762 984 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 MUM1Q2TAK8 710 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 INTS6LQ5JSJ4 861 aaKnown RBP11.83□□□□□ -0.52
FIRRE-201ENST00000427391 FAM91A1Q658Y4 838 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 PM20D1Q6GTS8 502 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 C14orf80Q86SX3 495 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 RASAL3Q86YV0 1011 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 KBTBD2Q8IY47 623 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 CFAP61Q8NHU2 1237 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 RAB3IL1Q8TBN0 382 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 GPR152Q8TDT2 470 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 CCDC124Q96CT7 223 aaKnown RBP11.83□□□□□ -0.52
FIRRE-201ENST00000427391 PGAP3Q96FM1 320 aaPredicted RBP11.83□□□□□ -0.52
FIRRE-201ENST00000427391 ZIC5Q96T25 663 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 MTG1Q9BT17 334 aaPredicted RBP11.83□□□□□ -0.52
FIRRE-201ENST00000427391 CSNK1G1Q9HCP0 422 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 TTC24A2A3L6 582 aaPredicted RBP11.83□□□□□ -0.52
FIRRE-201ENST00000427391 NEMP1O14524 444 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 DCXO43602 365 aa11.83□□□□□ -0.52
FIRRE-201ENST00000427391 ZBTB14O43829 449 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms