RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 ARNTL2Q8WYA1 636 aa15.52■□□□□ 0.07
ACTB-204ENST00000425660 PRICKLE1Q96MT3 831 aaPredicted RBP15.52■□□□□ 0.07
ACTB-204ENST00000425660 SLC22A12Q96S37 553 aa15.52■□□□□ 0.07
ACTB-204ENST00000425660 C17orf80Q9BSJ5 609 aa15.52■□□□□ 0.07
ACTB-204ENST00000425660 NAT9Q9BTE0 207 aa15.52■□□□□ 0.07
ACTB-204ENST00000425660 CAPS2Q9BXY5 557 aa15.52■□□□□ 0.07
ACTB-204ENST00000425660 CNOT10Q9H9A5 744 aaKnown RBP15.52■□□□□ 0.07
ACTB-204ENST00000425660 AAR2Q9Y312 384 aaKnown RBP15.52■□□□□ 0.07
ACTB-204ENST00000425660 NYNRINQ9P2P1 1898 aaKnown RBP15.52■□□□□ 0.07
ACTB-204ENST00000425660 ANAPC1Q9H1A4 1944 aa15.52■□□□□ 0.07
ACTB-204ENST00000425660 LAMA3Q16787 3333 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 MYO18AQ92614 2054 aaKnown RBP15.51■□□□□ 0.07
ACTB-204ENST00000425660 GREM1O60565 184 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 CPP00450 1065 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 GABRR2P28476 465 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 ATP1A2P50993 1020 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 RENBPP51606 427 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 NR1H3Q13133 447 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 SERINC3Q13530 473 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 CAMK1Q14012 370 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 POLD3Q15054 466 aaPredicted RBP15.51■□□□□ 0.07
ACTB-204ENST00000425660 STEAP4Q687X5 459 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 RFWD3Q6PCD5 774 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 ADGRD1Q6QNK2 874 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 UNC5AQ6ZN44 842 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 CIR1Q86X95 450 aaPredicted RBP15.51■□□□□ 0.07
ACTB-204ENST00000425660 TEX26Q8N6G2 289 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 ARHGEF2Q92974 986 aaKnown RBP15.51■□□□□ 0.07
ACTB-204ENST00000425660 OXNAD1Q96HP4 312 aaPredicted RBP15.51■□□□□ 0.07
ACTB-204ENST00000425660 LRRC40Q9H9A6 602 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 GLOD4Q9HC38 313 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 CASS4Q9NQ75 786 aa15.51■□□□□ 0.07
ACTB-204ENST00000425660 PSMC3IPQ9P2W1 217 aaPredicted RBP15.51■□□□□ 0.07
ACTB-204ENST00000425660 AP3B1O00203 1094 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 PSMD3O43242 534 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 CLDN11O75508 207 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 MBL2P11226 248 aaPredicted RBP15.5■□□□□ 0.07
ACTB-204ENST00000425660 PFKLP17858 780 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 ZXDBP98169 803 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 PRPSAP1Q14558 356 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 PLPP4Q5VZY2 271 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 TXNDC8Q6A555 127 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 CHST9Q7L1S5 443 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 GSDMBQ8TAX9 411 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 ADAMTS19Q8TE59 1207 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 CYP2S1Q96SQ9 504 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 PAFAH2Q99487 392 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 DDX50Q9BQ39 737 aaKnown RBP15.5■□□□□ 0.07
ACTB-204ENST00000425660 RBM22Q9NW64 420 aaKnown RBP eCLIP15.5■□□□□ 0.079e-11■■■□□ 18.6
ACTB-204ENST00000425660 TTLL3Q9Y4R7 772 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 ZFP37Q9Y6Q3 630 aaPredicted RBP15.5■□□□□ 0.07
ACTB-204ENST00000425660 POC1B-GALNT4F8VUJ3 575 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 J3KR12 359 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 GFRA2O00451 464 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 ANXA9O76027 345 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 ALDH1A2O94788 518 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 ARHGEF15O94989 841 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 HLA-DQB2P05538 268 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 HDCP19113 662 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 CDC25CP30307 473 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 MDH1P40925 334 aaKnown RBP15.5■□□□□ 0.07
ACTB-204ENST00000425660 SLC7A9P82251 487 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 SMAD3P84022 425 aaKnown RBP15.5■□□□□ 0.07
ACTB-204ENST00000425660 IL10RBQ08334 325 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 SKIDA1Q1XH10 827 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 KBTBD12Q3ZCT8 623 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 TTC39BQ5VTQ0 682 aaPredicted RBP15.5■□□□□ 0.07
ACTB-204ENST00000425660 NAPEPLDQ6IQ20 393 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 Q6ZNB5 142 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 OTOP3Q7RTS5 596 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 CFAP52Q8N1V2 620 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 ELMOD1Q8N336 334 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 ARL14EPQ8N8R7 260 aaPredicted RBP15.5■□□□□ 0.07
ACTB-204ENST00000425660 MRPS31Q92665 395 aaKnown RBP15.5■□□□□ 0.07
ACTB-204ENST00000425660 WBP2Q969T9 261 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 STAMBPL1Q96FJ0 436 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 MAGEH1Q9H213 219 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 MOCS1Q9NZB8 636 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.5■□□□□ 0.07
ACTB-204ENST00000425660 TBK1Q9UHD2 729 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 PCDHA11Q9Y5I1 949 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 MAD1L1Q9Y6D9 718 aa15.5■□□□□ 0.07
ACTB-204ENST00000425660 CDH23Q9H251 3354 aa15.49■□□□□ 0.07
ACTB-204ENST00000425660 A0A1B0GVM2 712 aa15.49■□□□□ 0.07
ACTB-204ENST00000425660 TCAF2A6NFQ2 919 aa15.49■□□□□ 0.07
ACTB-204ENST00000425660 EPHA5P54756 1037 aa15.49■□□□□ 0.07
ACTB-204ENST00000425660 RPS24P62847 133 aaKnown RBP15.49■□□□□ 0.07
ACTB-204ENST00000425660 SPARCL1Q14515 664 aa15.49■□□□□ 0.07
ACTB-204ENST00000425660 EFTUD2Q15029 972 aaKnown RBP eCLIP15.49■□□□□ 0.071e-36■■■■■ 39.6
ACTB-204ENST00000425660 MARC1Q5VT66 337 aa15.49■□□□□ 0.07
ACTB-204ENST00000425660 SPRED2Q7Z698 418 aa15.49■□□□□ 0.07
ACTB-204ENST00000425660 LINC00523Q86TU6 105 aa15.49■□□□□ 0.07
ACTB-204ENST00000425660 SETD3Q86TU7 594 aaPredicted RBP15.49■□□□□ 0.07
ACTB-204ENST00000425660 FAM217AQ8IXS0 508 aa15.49■□□□□ 0.07
ACTB-204ENST00000425660 OR52K1Q8NGK4 314 aa15.49■□□□□ 0.07
ACTB-204ENST00000425660 USP33Q8TEY7 942 aa15.49■□□□□ 0.07
ACTB-204ENST00000425660 DCAKDQ8WVC6 231 aa15.49■□□□□ 0.07
ACTB-204ENST00000425660 SLC44A1Q8WWI5 657 aa15.49■□□□□ 0.07
ACTB-204ENST00000425660 CFAP36Q96G28 342 aa15.49■□□□□ 0.07
ACTB-204ENST00000425660 PDFQ9HBH1 243 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms