RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 TMC6Q7Z403 805 aa12.6□□□□□ -0.39
HLA-DQB3-203ENST00000425319 TMEM110Q86TL2 294 aa12.6□□□□□ -0.39
HLA-DQB3-203ENST00000425319 CREBRFQ8IUR6 639 aa12.6□□□□□ -0.39
HLA-DQB3-203ENST00000425319 TMIEQ8NEW7 156 aa12.6□□□□□ -0.39
HLA-DQB3-203ENST00000425319 ZNF606Q8WXB4 792 aa12.6□□□□□ -0.39
HLA-DQB3-203ENST00000425319 FEM1AQ9BSK4 669 aa12.6□□□□□ -0.39
HLA-DQB3-203ENST00000425319 SLC4A5Q9BY07 1137 aa12.6□□□□□ -0.39
HLA-DQB3-203ENST00000425319 PDCL3Q9H2J4 239 aa12.6□□□□□ -0.39
HLA-DQB3-203ENST00000425319 ASNSD1Q9NWL6 643 aa12.6□□□□□ -0.39
HLA-DQB3-203ENST00000425319 COX16Q9P0S2 106 aa12.6□□□□□ -0.39
HLA-DQB3-203ENST00000425319 ARHGAP20Q9P2F6 1191 aa12.6□□□□□ -0.39
HLA-DQB3-203ENST00000425319 PPM1HQ9ULR3 514 aa12.6□□□□□ -0.39
HLA-DQB3-203ENST00000425319 RAI2Q9Y5P3 530 aa12.6□□□□□ -0.39
HLA-DQB3-203ENST00000425319 URB1O60287 2271 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB3-203ENST00000425319 PKD1L2Q7Z442 2459 aa12.6□□□□□ -0.39
HLA-DQB3-203ENST00000425319 J3QKU1 62 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 WNT9AO14904 365 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 FFAR2O15552 330 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 HSF2BPO75031 334 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 USP12O75317 370 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 F9P00740 461 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 FYNP06241 537 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 RHOCP08134 193 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 CKMT1AP12532 417 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 DGKAP23743 735 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 GNA15P30679 374 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 CHRNA3P32297 505 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 DRD3P35462 400 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 KRT9P35527 623 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 RPL34P49207 117 aaKnown RBP12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 CLCN6P51797 869 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 CDH4P55283 916 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 PPP2CBP62714 309 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 PPP2CAP67775 309 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 PTK2Q05397 1052 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 SLC20A2Q08357 652 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 NME3Q13232 169 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 PROX2Q3B8N5 592 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 POM121L1PQ3SYA9 428 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 KLHL10Q6JEL2 608 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 RETSATQ6NUM9 610 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 FBXL22Q6P050 247 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 HORMAD1Q86X24 394 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 SPATS2Q86XZ4 545 aaKnown RBP12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 SPACA3Q8IXA5 215 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 DEFB106AQ8N104 65 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 MAPK15Q8TD08 544 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 BTN2A2Q8WVV5 523 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 KCNE4Q8WWG9 221 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 CRELD1Q96HD1 420 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 TIGD1Q96MW7 591 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 SIK2Q9H0K1 926 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 WDCPQ9H6R7 721 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 POLR1BQ9H9Y6 1135 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 NLGN3Q9NZ94 848 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 HS3ST3A1Q9Y663 406 aa12.59□□□□□ -0.39
HLA-DQB3-203ENST00000425319 A0A1W2PQU0 124 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 A6NNZ2 444 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 E5RJQ4 531 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 OPA1O60313 960 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PRB1P04280 392 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 LSSP48449 732 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 CLDN6P56747 220 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 RPS21P63220 83 aaKnown RBP12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 GABREP78334 506 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 AUHQ13825 339 aaKnown RBP12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SMYD5Q6GMV2 418 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 OR6B2Q6IFH4 312 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 C11orf57Q6ZUT1 292 aaPredicted RBP12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ZDHHC17Q8IUH5 632 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SH2D3CQ8N5H7 860 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 WDR48Q8TAF3 677 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 FRS2Q8WU20 508 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 COL26A1Q96A83 441 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 NAF1Q96HR8 494 aaKnown RBP12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PPP1R13BQ96KQ4 1090 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 IL12RB2Q99665 862 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 OSBPL2Q9H1P3 480 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 GOLPH3LQ9H4A5 285 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 DNAJC28Q9NX36 388 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 VANGL2Q9ULK5 521 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 STAP1Q9ULZ2 295 aa12.58□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PLXNB3Q9ULL4 1909 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 TRIM49BA6NDI0 452 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 NEMP1O14524 444 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 FPGTO14772 594 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SCAMP1O15126 338 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 KLK10O43240 276 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 GABBR2O75899 941 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 VAV1P15498 845 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 NOS2P35228 1153 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 BPIFB4P59827 614 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 TLE3Q04726 772 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 MAPK8IP2Q13387 824 aaPredicted RBP12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PTK2BQ14289 1009 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 KIAA1161Q6NSJ0 714 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 DENND1BQ6P3S1 775 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 FOXR2Q6PJQ5 311 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 Q6ZVU0 165 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms