RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 HS3ST2Q9Y278 367 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 CEP83Q9Y592 693 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.4■□□□□ 0.06
ATG4B-209ENST00000425239 SETXQ7Z333 2677 aaKnown RBP15.39■□□□□ 0.05
ATG4B-209ENST00000425239 BICDL2A1A5D9 508 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 ALOX15BO15296 676 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 THAP12O43422 761 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 C1QL1O75973 258 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 CNTN5O94779 1100 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 SLC2A3P11169 496 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 SRCP12931 536 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 HNF1BP35680 557 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 NUDT1P36639 197 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 NUCB2P80303 420 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 CDK17Q00537 523 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 INSM1Q01101 510 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-209ENST00000425239 C6orf118Q5T5N4 469 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 DPY19L2P1Q6NXN4 242 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 TRIM65Q6PJ69 517 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 OLFML1Q6UWY5 402 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 Q6ZVU0 165 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 ENOSF1Q7L5Y1 443 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 IRF2BP1Q8IU81 584 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 DCBLD1Q8N8Z6 715 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 OR2A12Q8NGT7 310 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 OR8D1Q8WZ84 308 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 SHC3Q92529 594 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 NT5C3BQ969T7 300 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 NXPE2Q96DL1 559 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 PPP1R13BQ96KQ4 1090 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 DDIT4Q9NX09 232 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 SLC12A6Q9UHW9 1150 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 HOOK1Q9UJC3 728 aaKnown RBP15.39■□□□□ 0.05
ATG4B-209ENST00000425239 VANGL2Q9ULK5 521 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 CTNND2Q9UQB3 1225 aa15.39■□□□□ 0.05
ATG4B-209ENST00000425239 GOLGA6L4A6NEF3 574 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 PRAMEF26H0Y7S4 382 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 SMAD6O43541 496 aaKnown RBP15.38■□□□□ 0.05
ATG4B-209ENST00000425239 SIGLEC6O43699 453 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 PAGE1O75459 146 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 ZNF821O75541 412 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-209ENST00000425239 GRAP2O75791 330 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 TFE3P19532 575 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-209ENST00000425239 GGCXP38435 758 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 ABCG1P45844 678 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 OXCT1P55809 520 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 SEMG2Q02383 582 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 ZNF211Q13398 564 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-209ENST00000425239 STAT4Q14765 748 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 POM121L1PQ3SYA9 428 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 SLC45A4Q5BKX6 768 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 EFHC1Q5JVL4 640 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 RABGAP1LQ5R372 815 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 FAM46CQ5VWP2 391 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 FAM183BPQ6ZVS7 135 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 SNIP1Q8TAD8 396 aaKnown RBP15.38■□□□□ 0.05
ATG4B-209ENST00000425239 VOPP1Q96AW1 172 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 RPRD1AQ96P16 312 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-209ENST00000425239 DCBLD2Q96PD2 775 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 CRACR2AQ9BSW2 395 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 SIX2Q9NPC8 291 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 UCKL1Q9NWZ5 548 aa15.38■□□□□ 0.05
ATG4B-209ENST00000425239 AJAP1Q9UKB5 411 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-209ENST00000425239 DRGXA6NNA5 263 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 K7ERQ8 282 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 BIN1O00499 593 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 RNGTTO60942 597 aaKnown RBP15.37■□□□□ 0.05
ATG4B-209ENST00000425239 HSF2BPO75031 334 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 SDC3O75056 442 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 CLDN11O75508 207 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 ADCY5O95622 1261 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 ERBB2P04626 1255 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 DGKAP23743 735 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 CLCN1P35523 988 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 KCNMA1Q12791 1236 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 PAK1Q13153 545 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 ZNF284Q2VY69 593 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 ACCSLQ4AC99 568 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 ALFQ53S48 1182 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 SMYD5Q6GMV2 418 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 NEK5Q6P3R8 708 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 PCSK4Q6UW60 755 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 SLC26A9Q7LBE3 791 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 DSG4Q86SJ6 1040 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 TMIEQ8NEW7 156 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 ZNF397Q8NF99 534 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-209ENST00000425239 ARRDC3Q96B67 414 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 NPY6RQ99463 290 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 FAM204AQ9H8W3 233 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 PREBQ9HCU5 417 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 PIGVQ9NUD9 493 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 ARHGEF38Q9NXL2 777 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 APEX2Q9UBZ4 518 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 ZNF212Q9UDV6 495 aa15.37■□□□□ 0.05
ATG4B-209ENST00000425239 ZFR2Q9UPR6 939 aaKnown RBP15.37■□□□□ 0.05
ATG4B-209ENST00000425239 SYNJ2BP-COX16A0A087WUM0 186 aa15.36■□□□□ 0.05
ATG4B-209ENST00000425239 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-209ENST00000425239 LY6G6EA0A0G2JKS1 128 aa15.36■□□□□ 0.05
ATG4B-209ENST00000425239 SNAP91O60641 907 aa15.36■□□□□ 0.05
ATG4B-209ENST00000425239 MAGEC1O60732 1142 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms