RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ZDHHC7Q9NXF8 308 aa5.12□□□□□ -1.59
LINC01040-201ENST00000425048 COPG1Q9Y678 874 aaKnown RBP5.12□□□□□ -1.59
LINC01040-201ENST00000425048 SOX30O94993 753 aa5.11□□□□□ -1.59
LINC01040-201ENST00000425048 MYZAPP0CAP1 466 aa5.11□□□□□ -1.59
LINC01040-201ENST00000425048 HARSP12081 509 aaKnown RBP5.11□□□□□ -1.59
LINC01040-201ENST00000425048 PPP3CCP48454 512 aa5.11□□□□□ -1.59
LINC01040-201ENST00000425048 CYP2J2P51589 502 aa5.11□□□□□ -1.59
LINC01040-201ENST00000425048 ZBTB16Q05516 673 aa5.11□□□□□ -1.59
LINC01040-201ENST00000425048 IFIT5Q13325 482 aaKnown RBP5.11□□□□□ -1.59
LINC01040-201ENST00000425048 DGKHQ86XP1 1220 aa5.11□□□□□ -1.59
LINC01040-201ENST00000425048 PALB2Q86YC2 1186 aa5.11□□□□□ -1.59
LINC01040-201ENST00000425048 HORMAD2Q8N7B1 307 aa5.11□□□□□ -1.59
LINC01040-201ENST00000425048 TSR2Q969E8 191 aaKnown RBP5.11□□□□□ -1.59
LINC01040-201ENST00000425048 WBP2Q969T9 261 aa5.11□□□□□ -1.59
LINC01040-201ENST00000425048 NODALQ96S42 347 aa5.11□□□□□ -1.59
LINC01040-201ENST00000425048 TBCBQ99426 244 aa5.11□□□□□ -1.59
LINC01040-201ENST00000425048 SORBS1Q9BX66 1292 aaKnown RBP5.11□□□□□ -1.59
LINC01040-201ENST00000425048 FRMD8Q9BZ67 464 aaPredicted RBP5.11□□□□□ -1.59
LINC01040-201ENST00000425048 ARL15Q9NXU5 204 aa5.11□□□□□ -1.59
LINC01040-201ENST00000425048 RAI2Q9Y5P3 530 aa5.11□□□□□ -1.59
LINC01040-201ENST00000425048 TCRBV7S3A2A0A539 114 aa5.1□□□□□ -1.59
LINC01040-201ENST00000425048 PCDH17O14917 1159 aa5.1□□□□□ -1.59
LINC01040-201ENST00000425048 HNRNPDLO14979 420 aaKnown RBP5.1□□□□□ -1.59
LINC01040-201ENST00000425048 LDB2O43679 373 aa5.1□□□□□ -1.59
LINC01040-201ENST00000425048 HOXB9P17482 250 aaPredicted RBP5.1□□□□□ -1.59
LINC01040-201ENST00000425048 SLC30A9Q6PML9 568 aa5.1□□□□□ -1.59
LINC01040-201ENST00000425048 FAM177A1Q8N128 213 aaPredicted RBP5.1□□□□□ -1.59
LINC01040-201ENST00000425048 ZNF566Q969W8 418 aa5.1□□□□□ -1.59
LINC01040-201ENST00000425048 GFM1Q96RP9 751 aaKnown RBP5.1□□□□□ -1.59
LINC01040-201ENST00000425048 TMEM120AQ9BXJ8 343 aa5.1□□□□□ -1.59
LINC01040-201ENST00000425048 IGSF9Q9P2J2 1179 aa5.1□□□□□ -1.59
LINC01040-201ENST00000425048 SRPRBQ9Y5M8 271 aaKnown RBP5.1□□□□□ -1.59
LINC01040-201ENST00000425048 NOTCH3Q9UM47 2321 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 PRR23AA6NEV1 266 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 BMPR1BO00238 502 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 RPP40O75818 363 aaKnown RBP5.09□□□□□ -1.59
LINC01040-201ENST00000425048 FGF18O76093 207 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 UNGP13051 313 aaPredicted RBP5.09□□□□□ -1.59
LINC01040-201ENST00000425048 ATF3P18847 181 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 PMS2P11Q13670 270 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 ZNF284Q2VY69 593 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 RINT1Q6NUQ1 792 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 NRSN1Q8IZ57 195 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 CEP76Q8TAP6 659 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 CLEC4CQ8WTT0 213 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 PKP4Q99569 1192 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 SLC25A33Q9BSK2 321 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 SPRY4Q9C004 299 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 TM7SF3Q9NS93 570 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 PKP3Q9Y446 797 aa5.09□□□□□ -1.59
LINC01040-201ENST00000425048 IGLV5-52A0A0A0MRZ9 124 aa5.08□□□□□ -1.6
LINC01040-201ENST00000425048 KRTAP9-6A8MVA2 160 aa5.08□□□□□ -1.6
LINC01040-201ENST00000425048 SERPINI2O75830 405 aa5.08□□□□□ -1.6
LINC01040-201ENST00000425048 TMCC1O94876 653 aa5.08□□□□□ -1.6
LINC01040-201ENST00000425048 HLA-DQA2P01906 255 aa5.08□□□□□ -1.6
LINC01040-201ENST00000425048 ENO3P13929 434 aaPredicted RBP5.08□□□□□ -1.6
LINC01040-201ENST00000425048 EEF1GP26641 437 aaKnown RBP5.08□□□□□ -1.6
LINC01040-201ENST00000425048 THPOP40225 353 aa5.08□□□□□ -1.6
LINC01040-201ENST00000425048 ALDH18A1P54886 795 aaKnown RBP5.08□□□□□ -1.6
LINC01040-201ENST00000425048 CDH12P55289 794 aa5.08□□□□□ -1.6
LINC01040-201ENST00000425048 ACSM2AQ08AH3 577 aa5.08□□□□□ -1.6
LINC01040-201ENST00000425048 SLC35G1Q2M3R5 365 aa5.08□□□□□ -1.6
LINC01040-201ENST00000425048 FAM209BQ5JX69 171 aa5.08□□□□□ -1.6
LINC01040-201ENST00000425048 MON1BQ7L1V2 547 aa5.08□□□□□ -1.6
LINC01040-201ENST00000425048 LILRB1Q8NHL6 650 aaPredicted RBP5.08□□□□□ -1.6
LINC01040-201ENST00000425048 TMEM163Q8TC26 289 aa5.08□□□□□ -1.6
LINC01040-201ENST00000425048 DONSONQ9NYP3 566 aa5.08□□□□□ -1.6
LINC01040-201ENST00000425048 CEP83Q9Y592 693 aa5.08□□□□□ -1.6
LINC01040-201ENST00000425048 SLC5A1P13866 664 aa5.07□□□□□ -1.6
LINC01040-201ENST00000425048 OAZ1P54368 228 aa5.07□□□□□ -1.6
LINC01040-201ENST00000425048 FAM3BP58499 235 aaPredicted RBP5.07□□□□□ -1.6
LINC01040-201ENST00000425048 BNC1Q01954 994 aa5.07□□□□□ -1.6
LINC01040-201ENST00000425048 PKP1Q13835 747 aa5.07□□□□□ -1.6
LINC01040-201ENST00000425048 RAB30Q15771 203 aa5.07□□□□□ -1.6
LINC01040-201ENST00000425048 EFHC1Q5JVL4 640 aa5.07□□□□□ -1.6
LINC01040-201ENST00000425048 CEP85LQ5SZL2 805 aa5.07□□□□□ -1.6
LINC01040-201ENST00000425048 FAM171A1Q5VUB5 890 aa5.07□□□□□ -1.6
LINC01040-201ENST00000425048 ZNF449Q6P9G9 518 aa5.07□□□□□ -1.6
LINC01040-201ENST00000425048 MEX3BQ6ZN04 569 aaKnown RBP5.07□□□□□ -1.6
LINC01040-201ENST00000425048 EXOC3L1Q86VI1 746 aa5.07□□□□□ -1.6
LINC01040-201ENST00000425048 ENDOVQ8N8Q3 282 aaKnown RBP5.07□□□□□ -1.6
LINC01040-201ENST00000425048 MIGA1Q8NAN2 632 aa5.07□□□□□ -1.6
LINC01040-201ENST00000425048 EPYCQ99645 322 aa5.07□□□□□ -1.6
LINC01040-201ENST00000425048 SDF2L1Q9HCN8 221 aa5.07□□□□□ -1.6
LINC01040-201ENST00000425048 IGHV4-28A0A0C4DH34 117 aa5.06□□□□□ -1.6
LINC01040-201ENST00000425048 C17orf102A2RUQ5 167 aa5.06□□□□□ -1.6
LINC01040-201ENST00000425048 LINC01553A4QN01 128 aa5.06□□□□□ -1.6
LINC01040-201ENST00000425048 KIF28PB7ZC32 967 aa5.06□□□□□ -1.6
LINC01040-201ENST00000425048 HSPB6O14558 160 aa5.06□□□□□ -1.6
LINC01040-201ENST00000425048 ITM2AO43736 263 aa5.06□□□□□ -1.6
LINC01040-201ENST00000425048 KLRK1P26718 216 aa5.06□□□□□ -1.6
LINC01040-201ENST00000425048 KRTAP10-12P60413 245 aa5.06□□□□□ -1.6
LINC01040-201ENST00000425048 RNASELQ05823 741 aaKnown RBP5.06□□□□□ -1.6
LINC01040-201ENST00000425048 SF3B4Q15427 424 aaKnown RBP eCLIP5.06□□□□□ -1.6
LINC01040-201ENST00000425048 C5orf22Q49AR2 442 aa5.06□□□□□ -1.6
LINC01040-201ENST00000425048 DPP9Q86TI2 863 aa5.06□□□□□ -1.6
LINC01040-201ENST00000425048 ZDHHC23Q8IYP9 409 aa5.06□□□□□ -1.6
LINC01040-201ENST00000425048 AGO1Q9UL18 857 aaKnown RBP5.06□□□□□ -1.6
LINC01040-201ENST00000425048 KIF26BQ2KJY2 2108 aa5.05□□□□□ -1.6
LINC01040-201ENST00000425048 LARGE1O95461 756 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms