RNA–Protein interactions for RNA: ENST00000424998.3

CNKSR3-201, Transcript of CNKSR family member 3, humanhuman

TSL 5

Gene CNKSR3, Length 536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-201ENST00000424998 TFAP2CQ92754 450 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 TNPO1Q92973 898 aaKnown RBP3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 TTC17Q96AE7 1141 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 PGBD4Q96DM1 585 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 SLC35A4Q96G79 324 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 MRGPRX4Q96LA9 322 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 CAMK1GQ96NX5 476 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 DMRTA2Q96SC8 542 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 SENP7Q9BQF6 1050 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 PAAF1Q9BRP4 392 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 MRPL9Q9BYD2 267 aaKnown RBP3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 C11orf54Q9H0W9 315 aaPredicted RBP3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 CXCL16Q9H2A7 254 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 AZI2Q9H6S1 392 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 KAT14Q9H8E8 782 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 BRD9Q9H8M2 597 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 PNPOQ9NVS9 261 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 MIOSQ9NXC5 875 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 CALCOCO1Q9P1Z2 691 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 DNMT3BQ9UBC3 853 aaKnown RBP3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 SLC9A2Q9UBY0 812 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 PNMA2Q9UL42 364 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 PIN4Q9Y237 131 aaKnown RBP3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 HES2Q9Y543 173 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 PCDHGB6Q9Y5F9 930 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 UBIAD1Q9Y5Z9 338 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 PLXNB3Q9ULL4 1909 aa3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 COL5A1P20908 1838 aaPredicted RBP3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 URB1O60287 2271 aaKnown RBP3.69□□□□□ -1.82
CNKSR3-201ENST00000424998 MYO9AB2RTY4 2548 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 CCDC194A0A1B0GVG4 234 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 PMS2P1A4D2B8 440 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 B5MCH6 92 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 FAM227AF5H4B4 570 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 ADAMTS3O15072 1205 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 NCAM2O15394 837 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 ANP32CO43423 234 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 FOXS1O43638 330 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 IPO13O94829 963 aaKnown RBP3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 CAVIN2O95810 425 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 ZFYP08048 801 aaPredicted RBP3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 CEACAM1P13688 526 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 DARSP14868 501 aaKnown RBP3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 U2AF2P26368 475 aaKnown RBP eCLIP3.68□□□□□ -1.821e-7■□□□□ 9.6
CNKSR3-201ENST00000424998 MLH1P40692 756 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 IL12RB1P42701 662 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 SCNN1GP51170 649 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 CLRN1P58418 232 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 RAB1AP62820 205 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 IRX4P78413 519 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 FOXL1Q12952 345 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 FGL2Q14314 439 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 HLTFQ14527 1009 aaKnown RBP eCLIP3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 PON2Q15165 354 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 CNN3Q15417 329 aaKnown RBP3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 ANO6Q4KMQ2 910 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 PABPC1LQ4VXU2 614 aaKnown RBP3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 HSP90AB4PQ58FF6 505 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 PPM1LQ5SGD2 360 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 SWSAP1Q6NVH7 229 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 EFCAB12Q6NXP0 572 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 MFSD6Q6ZSS7 791 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 CACNA2D4Q7Z3S7 1137 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 SRGAP1Q7Z6B7 1085 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 WDR5BQ86VZ2 330 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 RAB11FIP4Q86YS3 637 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 COLGALT2Q8IYK4 626 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 NME8Q8N427 588 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 SPEM1Q8N4L4 309 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 LINC01465Q8N7H1 131 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 FRMD1Q8N878 549 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 DCBLD1Q8N8Z6 715 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 BRIX1Q8TDN6 353 aaKnown RBP3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 ST8SIA2Q92186 375 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 GJA10Q969M2 543 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 SCLT1Q96NL6 688 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 NT5C1BQ96P26 610 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 LRRC3BQ96PB8 259 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 CLSTN3Q9BQT9 956 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 BDH2Q9BUT1 245 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 C1orf43Q9BWL3 253 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 APOL6Q9BWW8 343 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 PACSIN1Q9BY11 444 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 TRIM4Q9C037 500 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 LRRCC1Q9C099 1032 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 SEMA4CQ9C0C4 833 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 ENKD1Q9H0I2 346 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 ZNF334Q9HCZ1 680 aaPredicted RBP3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 SARS2Q9NP81 518 aaKnown RBP3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 TMEM9BQ9NQ34 198 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 VPS45Q9NRW7 570 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 GTSE1Q9NYZ3 720 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 FBXW11Q9UKB1 542 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 PCDHA6Q9UN73 950 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 SH3BP1Q9Y3L3 701 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 ATMQ13315 3056 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 ADAMTS9Q9P2N4 1935 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 MGAQ8IWI9 3026 aa3.68□□□□□ -1.82
CNKSR3-201ENST00000424998 PTPRQQ9UMZ3 2332 aa3.67□□□□□ -1.82
CNKSR3-201ENST00000424998 SHROOM3Q8TF72 1996 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms