RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 GATAD2AQ86YP4 633 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 ZNF683Q8IZ20 524 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 SAP25Q8TEE9 199 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 SLC20A1Q8WUM9 679 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 ELF4Q99607 663 aaPredicted RBP13.35□□□□□ -0.27
VRK3-203ENST00000424804 TRIM62Q9BVG3 475 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 CCDC86Q9H6F5 360 aaKnown RBP13.35□□□□□ -0.27
VRK3-203ENST00000424804 FAM204AQ9H8W3 233 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 ASNSD1Q9NWL6 643 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 DOCK4Q8N1I0 1966 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 TRABD2BA6NFA1 517 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 GOLGA8CPA6NN73 597 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 GOLGA8SH3BPF8 625 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 ATP9BO43861 1147 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 APOEP02649 317 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 GLI1P08151 1106 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 TFE3P19532 575 aaPredicted RBP13.34□□□□□ -0.27
VRK3-203ENST00000424804 C5AR1P21730 350 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 GRK6P43250 576 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 PSMD8P48556 350 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 CENPCQ03188 943 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 SLC12A1Q13621 1099 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 AUHQ13825 339 aaKnown RBP13.34□□□□□ -0.27
VRK3-203ENST00000424804 IQCB1Q15051 598 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 EFHC1Q5JVL4 640 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 NAA35Q5VZE5 725 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 C19orf48Q6RUI8 117 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 SND1Q7KZF4 910 aaKnown RBP eCLIP13.34□□□□□ -0.27
VRK3-203ENST00000424804 APTXQ7Z2E3 356 aaKnown RBP13.34□□□□□ -0.27
VRK3-203ENST00000424804 SPATS2Q86XZ4 545 aaKnown RBP13.34□□□□□ -0.27
VRK3-203ENST00000424804 ATP6V0D2Q8N8Y2 350 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 EPS8L1Q8TE68 723 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 CPA5Q8WXQ8 436 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 RNF34Q969K3 372 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 ERGIC2Q96RQ1 377 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 OMDQ99983 421 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 FEM1AQ9BSK4 669 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 HS3ST4Q9Y661 456 aa13.34□□□□□ -0.27
VRK3-203ENST00000424804 A0A1B0GVM2 712 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 TYW5A2RUC4 315 aaKnown RBP13.33□□□□□ -0.28
VRK3-203ENST00000424804 FAM149AA5PLN7 773 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 TCAF2A6NFQ2 919 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 LRRC10BA6NIK2 292 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 F5H5T6 163 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 DFNA5O60443 496 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 RNASEH1O60930 286 aaKnown RBP13.33□□□□□ -0.28
VRK3-203ENST00000424804 CD38P28907 300 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 GGCXP38435 758 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 CLDN6P56747 220 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 JAM2P57087 298 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 NXPH1P58417 271 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 TAS2R38P59533 333 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 CDK17Q00537 523 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 BNIP3Q12983 259 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 NME3Q13232 169 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 COL9A2Q14055 689 aaPredicted RBP13.33□□□□□ -0.28
VRK3-203ENST00000424804 FAM102AQ5T9C2 384 aaPredicted RBP13.33□□□□□ -0.28
VRK3-203ENST00000424804 PHLDB2Q86SQ0 1253 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 MSANTD4Q8NCY6 345 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 GANCQ8TET4 914 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 TSC1Q92574 1164 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 NT5C3BQ969T7 300 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 PSMB7Q99436 277 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 ACE2Q9BYF1 805 aaPredicted RBP13.33□□□□□ -0.28
VRK3-203ENST00000424804 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
VRK3-203ENST00000424804 DDIT4Q9NX09 232 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 PPM1HQ9ULR3 514 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 TBC1D30Q9Y2I9 924 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 RAXQ9Y2V3 346 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 BPTFQ12830 3046 aa13.33□□□□□ -0.28
VRK3-203ENST00000424804 LRRC72A6NJI9 287 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 HSF2BPO75031 334 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 RTN2O75298 545 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 CNTN5O94779 1100 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 MOCS3O95396 460 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 ADH1BP00325 375 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 MT-CO1P00395 513 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 CTSLP07711 333 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 CCR1P32246 355 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 RXRGP48443 463 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 CDR2Q01850 454 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 SLC6A3Q01959 620 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 CYP4F3Q08477 520 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 ELAVL3Q14576 367 aaKnown RBP13.32□□□□□ -0.28
VRK3-203ENST00000424804 COL28A1Q2UY09 1125 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 SOWAHCQ53LP3 525 aaPredicted RBP13.32□□□□□ -0.28
VRK3-203ENST00000424804 AGBL4Q5VU57 503 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 SFMBT2Q5VUG0 894 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 SMYD5Q6GMV2 418 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 DHRS13Q6UX07 377 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.32□□□□□ -0.28
VRK3-203ENST00000424804 ZNF397Q8NF99 534 aaPredicted RBP13.32□□□□□ -0.28
VRK3-203ENST00000424804 OR14C36Q8NHC7 312 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 C18orf8Q96DM3 657 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 NAP1L5Q96NT1 182 aaPredicted RBP13.32□□□□□ -0.28
VRK3-203ENST00000424804 CAAP1Q9H8G2 361 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 DAAM1Q9Y4D1 1078 aa13.32□□□□□ -0.28
VRK3-203ENST00000424804 TLR4O00206 839 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 MCF2LO15068 1137 aa13.31□□□□□ -0.28
VRK3-203ENST00000424804 PLRG1O43660 514 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms