RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 CDH4P55283 916 aa16.62■□□□□ 0.25
DDR1-234ENST00000424544 POLR2FP61218 127 aaKnown RBP16.62■□□□□ 0.25
DDR1-234ENST00000424544 CENPCQ03188 943 aa16.62■□□□□ 0.25
DDR1-234ENST00000424544 SUZ12Q15022 739 aaKnown RBP16.62■□□□□ 0.25
DDR1-234ENST00000424544 CCNI2Q6ZMN8 369 aaPredicted RBP16.62■□□□□ 0.25
DDR1-234ENST00000424544 SND1Q7KZF4 910 aaKnown RBP eCLIP16.62■□□□□ 0.25
DDR1-234ENST00000424544 TMEM35BQ8NCS4 154 aa16.62■□□□□ 0.25
DDR1-234ENST00000424544 SNX19Q92543 992 aa16.62■□□□□ 0.25
DDR1-234ENST00000424544 C18orf8Q96DM3 657 aa16.62■□□□□ 0.25
DDR1-234ENST00000424544 RPRD1AQ96P16 312 aaPredicted RBP16.62■□□□□ 0.25
DDR1-234ENST00000424544 TMEM51Q9NW97 253 aa16.62■□□□□ 0.25
DDR1-234ENST00000424544 ARHGAP20Q9P2F6 1191 aa16.62■□□□□ 0.25
DDR1-234ENST00000424544 SARDHQ9UL12 918 aa16.62■□□□□ 0.25
DDR1-234ENST00000424544 VANGL2Q9ULK5 521 aa16.62■□□□□ 0.25
DDR1-234ENST00000424544 PPM1HQ9ULR3 514 aa16.62■□□□□ 0.25
DDR1-234ENST00000424544 BTBD3Q9Y2F9 522 aa16.62■□□□□ 0.25
DDR1-234ENST00000424544 FHOD1Q9Y613 1164 aa16.62■□□□□ 0.25
DDR1-234ENST00000424544 PKD1L2Q7Z442 2459 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 SYNJ2BP-COX16A0A087WUM0 186 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.61■□□□□ 0.25
DDR1-234ENST00000424544 LRRC72A6NJI9 287 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 H0Y8X5 98 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 TAF4O00268 1085 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 WNT9AO14904 365 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 MCF2LO15068 1137 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 EPHB6O15197 1021 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 LATO43561 262 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 RNASEH2AO75792 299 aaKnown RBP16.61■□□□□ 0.25
DDR1-234ENST00000424544 CNTN5O94779 1100 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 ADH1BP00325 375 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 NNMTP40261 264 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 ADPRHP54922 357 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 NME3Q13232 169 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 ZNF177Q13360 481 aaPredicted RBP16.61■□□□□ 0.25
DDR1-234ENST00000424544 TRIM14Q14142 442 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 BRMS1LQ5PSV4 323 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 RNF219Q5W0B1 726 aaPredicted RBP16.61■□□□□ 0.25
DDR1-234ENST00000424544 LAYNQ6UX15 382 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 ARCQ7LC44 396 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 XYLT1Q86Y38 959 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 RHBDD1Q8TEB9 315 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 SETD7Q8WTS6 366 aaKnown RBP16.61■□□□□ 0.25
DDR1-234ENST00000424544 CPLX3Q8WVH0 158 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 RNF34Q969K3 372 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 SPAG5Q96R06 1193 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 CDC6Q99741 560 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 OMDQ99983 421 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 STK33Q9BYT3 514 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 KDM4CQ9H3R0 1056 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 WDCPQ9H6R7 721 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.61■□□□□ 0.25
DDR1-234ENST00000424544 COX16Q9P0S2 106 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 ZNF212Q9UDV6 495 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 TMEM59LQ9UK28 342 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 TPX2Q9ULW0 747 aaKnown RBP16.61■□□□□ 0.25
DDR1-234ENST00000424544 TMEM131Q92545 1883 aa16.61■□□□□ 0.25
DDR1-234ENST00000424544 IGLV3-10A0A075B6K4 115 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 DFNA5O60443 496 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 ENDOD1O94919 500 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 F9P00740 461 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 TPM1P09493 284 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 TBX2Q13207 712 aaPredicted RBP16.6■□□□□ 0.25
DDR1-234ENST00000424544 SHBQ15464 509 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 DLG2Q15700 870 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 SLC25A52Q3SY17 297 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 ALFQ53S48 1182 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 TRNP1Q6NT89 227 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 SH2D3CQ8N5H7 860 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 GANCQ8TET4 914 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 SLC6A18Q96N87 628 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 PSMB7Q99436 277 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 TKTL2Q9H0I9 626 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 NLRC4Q9NPP4 1024 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 CAPN11Q9UMQ6 739 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 APOBEC2Q9Y235 224 aaKnown RBP16.6■□□□□ 0.25
DDR1-234ENST00000424544 HS3ST2Q9Y278 367 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 CEP83Q9Y592 693 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 FAM208BQ5VWN6 2430 aa16.6■□□□□ 0.25
DDR1-234ENST00000424544 DSPP15924 2871 aaKnown RBP16.59■□□□□ 0.25
DDR1-234ENST00000424544 A0A1B0GTQ1 180 aa16.59■□□□□ 0.25
DDR1-234ENST00000424544 A0A1W2PQJ5 194 aa16.59■□□□□ 0.25
DDR1-234ENST00000424544 FAM47DPA6NHR8 397 aa16.59■□□□□ 0.25
DDR1-234ENST00000424544 SRRM3A6NNA2 597 aaPredicted RBP16.59■□□□□ 0.25
DDR1-234ENST00000424544 LSM8O95777 96 aaKnown RBP16.59■□□□□ 0.25
DDR1-234ENST00000424544 MT-CO1P00395 513 aa16.59■□□□□ 0.25
DDR1-234ENST00000424544 IL1BP01584 269 aa16.59■□□□□ 0.25
DDR1-234ENST00000424544 ATXN1LP0C7T5 689 aaKnown RBP16.59■□□□□ 0.25
DDR1-234ENST00000424544 FLT3P36888 993 aa16.59■□□□□ 0.25
DDR1-234ENST00000424544 PSMD8P48556 350 aa16.59■□□□□ 0.25
DDR1-234ENST00000424544 NUMBP49757 651 aa16.59■□□□□ 0.25
DDR1-234ENST00000424544 METAP1P53582 386 aa16.59■□□□□ 0.25
DDR1-234ENST00000424544 ACBD5Q5T8D3 534 aaPredicted RBP16.59■□□□□ 0.25
DDR1-234ENST00000424544 TMPRSS7Q7RTY8 843 aa16.59■□□□□ 0.25
DDR1-234ENST00000424544 NOP9Q86U38 636 aaKnown RBP16.59■□□□□ 0.25
DDR1-234ENST00000424544 ERICH1Q86X53 443 aa16.59■□□□□ 0.25
DDR1-234ENST00000424544 SPC24Q8NBT2 197 aa16.59■□□□□ 0.25
DDR1-234ENST00000424544 OR14C36Q8NHC7 312 aa16.59■□□□□ 0.25
DDR1-234ENST00000424544 TTYH3Q9C0H2 523 aa16.59■□□□□ 0.25
DDR1-234ENST00000424544 SIK2Q9H0K1 926 aa16.59■□□□□ 0.25
DDR1-234ENST00000424544 IMPACTQ9P2X3 320 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms