RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ISCUQ9H1K1 167 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 RSPH9Q9H1X1 276 aaPredicted RBP11.22□□□□□ -0.61
USP49-204ENST00000423567 DEF6Q9H4E7 631 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 MTG2Q9H4K7 406 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 ATP13A1Q9HD20 1204 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 DONSONQ9NYP3 566 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 WSB2Q9NYS7 404 aaPredicted RBP11.22□□□□□ -0.61
USP49-204ENST00000423567 CDV3Q9UKY7 258 aaKnown RBP11.22□□□□□ -0.61
USP49-204ENST00000423567 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.22□□□□□ -0.61
USP49-204ENST00000423567 MYO15AQ9UKN7 3530 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.21□□□□□ -0.61
USP49-204ENST00000423567 TMEM191CA6NGB0 347 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 EIF3CLB5ME19 914 aaKnown RBP11.21□□□□□ -0.61
USP49-204ENST00000423567 CBX4O00257 560 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 ATP9BO43861 1147 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 CREB3O43889 395 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 PRPSAP2O60256 369 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 IGLV3-19P01714 112 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 EPHB2P29323 1055 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 HNRNPH3P31942 346 aaKnown RBP11.21□□□□□ -0.61
USP49-204ENST00000423567 HOXD12P35452 270 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 ID4P47928 161 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 GNA12Q03113 381 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 DLG2Q15700 870 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 PLA2G2CQ5R387 149 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 C9orf64Q5T6V5 341 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 MANEALQ5VSG8 457 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 ALKBH5Q6P6C2 394 aaKnown RBP11.21□□□□□ -0.61
USP49-204ENST00000423567 DNAAF5Q86Y56 855 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 STK40Q8N2I9 435 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 SH2D3CQ8N5H7 860 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 ATP11CQ8NB49 1132 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 CADM4Q8NFZ8 388 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 OR52K2Q8NGK3 314 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 CEP76Q8TAP6 659 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 OR8D1Q8WZ84 308 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 ZDHHC16Q969W1 377 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 EIF3CQ99613 913 aaKnown RBP11.21□□□□□ -0.61
USP49-204ENST00000423567 NUSAP1Q9BXS6 441 aaKnown RBP11.21□□□□□ -0.61
USP49-204ENST00000423567 BTBD1Q9H0C5 482 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 PABPC3Q9H361 631 aaKnown RBP11.21□□□□□ -0.61
USP49-204ENST00000423567 CATSPERBQ9H7T0 1116 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 CD93Q9NPY3 652 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 TMEM248Q9NWD8 314 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 SUSD2Q9UGT4 822 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 VPS51Q9UID3 782 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 FZD10Q9ULW2 581 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 HPCAL4Q9UM19 191 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 OR51B4Q9Y5P0 310 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 GVINP1Q7Z2Y8 2422 aa11.21□□□□□ -0.61
USP49-204ENST00000423567 A0A087X0T9 212 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 A0A0D9SEW6 157 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 C1QTNF3-AMACRE9PGA6 284 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 FAM72CH0Y354 149 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 ALOX15BO15296 676 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 FGF10O15520 208 aaPredicted RBP11.2□□□□□ -0.62
USP49-204ENST00000423567 AKR1B10O60218 316 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 BNIP3LO60238 219 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 SNAP91O60641 907 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 RAMP2O60895 175 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 ADH1BP00325 375 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 IL1BP01584 269 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 FAM228BP0C875 321 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 GNSP15586 552 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 ITPKAP23677 461 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 HTR7P34969 479 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 EIF4A3P38919 411 aaKnown RBP11.2□□□□□ -0.62
USP49-204ENST00000423567 RECQLP46063 649 aaPredicted RBP11.2□□□□□ -0.62
USP49-204ENST00000423567 PSMD8P48556 350 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 GEMIN4P57678 1058 aaKnown RBP11.2□□□□□ -0.62
USP49-204ENST00000423567 TPI1P60174 286 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 OGDHQ02218 1023 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 SLC20A2Q08357 652 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 ACAP1Q15027 740 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 SF3A2Q15428 464 aaKnown RBP11.2□□□□□ -0.62
USP49-204ENST00000423567 CST6Q15828 149 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 DUOXA1Q1HG43 343 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 RSPO4Q2I0M5 234 aaPredicted RBP11.2□□□□□ -0.62
USP49-204ENST00000423567 TRIM61Q5EBN2 209 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 FAM72AQ5TYM5 149 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 FAM46CQ5VWP2 391 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 FAM72DQ6L9T8 149 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 SARM1Q6SZW1 724 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 USP30Q70CQ3 517 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 FAM72BQ86X60 149 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 ZNF354CQ86Y25 554 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 CNGA4Q8IV77 575 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 MMAAQ8IVH4 418 aaKnown RBP11.2□□□□□ -0.62
USP49-204ENST00000423567 OR7D4Q8NG98 312 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 PTPRN2Q92932 1015 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 ZNF419Q96HQ0 510 aaPredicted RBP11.2□□□□□ -0.62
USP49-204ENST00000423567 PSMB7Q99436 277 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 DNAJC7Q99615 494 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 OMDQ99983 421 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 PCED1AQ9H1Q7 454 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 MAGEH1Q9H213 219 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 SMOC1Q9H4F8 434 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 SGK2Q9HBY8 427 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 FBXL12Q9NXK8 326 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 ARHGAP20Q9P2F6 1191 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms