RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 CLDN11O75508 207 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 ERBB2P04626 1255 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 RHOCP08134 193 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 CDK4P11802 303 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 NOS2P35228 1153 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 VASPP50552 380 aaPredicted RBP16.59■□□□□ 0.25
COL18A1-205ENST00000423214 METAP1P53582 386 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 DNAJC3Q13217 504 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 DLG2Q15700 870 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 PTPN20Q4JDL3 420 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 MFSD2AQ8NA29 543 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 FEM1AQ9BSK4 669 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 SIK2Q9H0K1 926 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 PDCL3Q9H2J4 239 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 SCUBE2Q9NQ36 999 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 KIAA1468Q9P260 1216 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 STAP1Q9ULZ2 295 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 DMTF1Q9Y222 760 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 HS3ST4Q9Y661 456 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 CHD5Q8TDI0 1954 aa16.58■□□□□ 0.25
COL18A1-205ENST00000423214 C10orf142B7Z368 130 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 PAGE1O75459 146 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 PON1P27169 355 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 SULT1E1P49888 294 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 IRAK1P51617 712 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 CDH4P55283 916 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 KRT83P78385 493 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 SLC6A3Q01959 620 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 CNTN1Q12860 1018 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 CAMK2BQ13554 666 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 STAT4Q14765 748 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 ACAP1Q15027 740 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 SHBQ15464 509 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 C6orf118Q5T5N4 469 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 AGBL4Q5VU57 503 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 IQCHQ86VS3 1027 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 TRIM69Q86WT6 500 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 ZDHHC17Q8IUH5 632 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 WDTC1Q8N5D0 677 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 SH2D3CQ8N5H7 860 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 OR52K2Q8NGK3 314 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 FAM131CQ96AQ9 280 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 C2orf49Q9BVC5 232 aaPredicted RBP16.58■□□□□ 0.24
COL18A1-205ENST00000423214 ERVMER34-1Q9H9K5 563 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 PREBQ9HCU5 417 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 DYRK4Q9NR20 520 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 RRN3Q9NYV6 651 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 SARDHQ9UL12 918 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 PAXBP1Q9Y5B6 917 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 LOC400499M0QZD8 3231 aa16.58■□□□□ 0.24
COL18A1-205ENST00000423214 C1SP09871 688 aa16.57■□□□□ 0.24
COL18A1-205ENST00000423214 JUPP14923 745 aa16.57■□□□□ 0.24
COL18A1-205ENST00000423214 ACADVLP49748 655 aa16.57■□□□□ 0.24
COL18A1-205ENST00000423214 OVGP1Q12889 678 aa16.57■□□□□ 0.24
COL18A1-205ENST00000423214 BRMS1LQ5PSV4 323 aa16.57■□□□□ 0.24
COL18A1-205ENST00000423214 FAM114A1Q8IWE2 563 aa16.57■□□□□ 0.24
COL18A1-205ENST00000423214 ATP11CQ8NB49 1132 aa16.57■□□□□ 0.24
COL18A1-205ENST00000423214 ALG14Q96F25 216 aa16.57■□□□□ 0.24
COL18A1-205ENST00000423214 LRIG1Q96JA1 1093 aa16.57■□□□□ 0.24
COL18A1-205ENST00000423214 TKTL2Q9H0I9 626 aa16.57■□□□□ 0.24
COL18A1-205ENST00000423214 WDCPQ9H6R7 721 aa16.57■□□□□ 0.24
COL18A1-205ENST00000423214 PLCB1Q9NQ66 1216 aa16.57■□□□□ 0.24
COL18A1-205ENST00000423214 PIGVQ9NUD9 493 aa16.57■□□□□ 0.24
COL18A1-205ENST00000423214 DNAJC12Q9UKB3 198 aa16.57■□□□□ 0.24
COL18A1-205ENST00000423214 AJAP1Q9UKB5 411 aaPredicted RBP16.57■□□□□ 0.24
COL18A1-205ENST00000423214 PRAMEF26H0Y7S4 382 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 KPNA3O00505 521 aaPredicted RBP16.56■□□□□ 0.24
COL18A1-205ENST00000423214 MCF2LO15068 1137 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 PNMA6AP0CW24 399 aaPredicted RBP16.56■□□□□ 0.24
COL18A1-205ENST00000423214 SRCP12931 536 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 RXRGP48443 463 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 CLDN6P56747 220 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 RNASE9P60153 205 aaKnown RBP16.56■□□□□ 0.24
COL18A1-205ENST00000423214 DEUP1Q05D60 604 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 CCDC15Q0P6D6 951 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 BNIP3Q12983 259 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 RAPGEF1Q13905 1077 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 MAN2A1Q16706 1144 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 HS1BP3Q53T59 392 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 HES3Q5TGS1 186 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 SMYD5Q6GMV2 418 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 LRRC31Q6UY01 552 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 SLC47A2Q86VL8 602 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 ZNF397Q8NF99 534 aaPredicted RBP16.56■□□□□ 0.24
COL18A1-205ENST00000423214 DCBLD2Q96PD2 775 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 MYOCQ99972 504 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 SIX2Q9NPC8 291 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.56■□□□□ 0.244e-6■■■■□ 26.5
COL18A1-205ENST00000423214 ARHGAP20Q9P2F6 1191 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 PPM1HQ9ULR3 514 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 HS3ST2Q9Y278 367 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 TBC1D30Q9Y2I9 924 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 OR51B4Q9Y5P0 310 aa16.56■□□□□ 0.24
COL18A1-205ENST00000423214 PES1O00541 588 aaKnown RBP16.55■□□□□ 0.24
COL18A1-205ENST00000423214 RNGTTO60942 597 aaKnown RBP16.55■□□□□ 0.24
COL18A1-205ENST00000423214 CNTN5O94779 1100 aa16.55■□□□□ 0.24
COL18A1-205ENST00000423214 ADCY5O95622 1261 aa16.55■□□□□ 0.24
COL18A1-205ENST00000423214 PRKCSHP14314 528 aaPredicted RBP16.55■□□□□ 0.24
COL18A1-205ENST00000423214 BPIFB4P59827 614 aa16.55■□□□□ 0.24
COL18A1-205ENST00000423214 FAM102AQ5T9C2 384 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms