RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 TNK2Q07912 1038 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 CBLBQ13191 982 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 MMRN1Q13201 1228 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 TRIM25Q14258 630 aaKnown RBP13.44□□□□□ -0.26
CALD1-205ENST00000422748 SMAD1Q15797 465 aaKnown RBP13.44□□□□□ -0.26
CALD1-205ENST00000422748 PGS1Q32NB8 556 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 MFSD14BQ5SR56 506 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 TDRD10Q5VZ19 366 aaKnown RBP13.44□□□□□ -0.26
CALD1-205ENST00000422748 B3GNT9Q6UX72 402 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 CYP2U1Q7Z449 544 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 PCDH20Q8N6Y1 951 aaKnown RBP13.44□□□□□ -0.26
CALD1-205ENST00000422748 FAM110BQ8TC76 370 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 SIGLEC10Q96LC7 697 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 MTG1Q9BT17 334 aaPredicted RBP13.44□□□□□ -0.26
CALD1-205ENST00000422748 FAM117AQ9C073 453 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 MUC3BQ9H195 1237 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 PAK5Q9P286 719 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 DNMT3BQ9UBC3 853 aaKnown RBP13.44□□□□□ -0.26
CALD1-205ENST00000422748 DKK3Q9UBP4 350 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 DAGLAQ9Y4D2 1042 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 KCNN4O15554 427 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 CNTFP26441 200 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 WNT7BP56706 349 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 PRKG1Q13976 671 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 RFTN1Q14699 578 aaPredicted RBP13.44□□□□□ -0.26
CALD1-205ENST00000422748 NOMO1Q15155 1222 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 HADHQ16836 314 aaKnown RBP13.44□□□□□ -0.26
CALD1-205ENST00000422748 FAM102BQ5T8I3 360 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 DSG4Q86SJ6 1040 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 MAP4K3Q8IVH8 894 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 SP8Q8IXZ3 490 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 GPD1LQ8N335 351 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 TMEM161BQ8NDZ6 487 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 JOSD2Q8TAC2 188 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 LPGAT1Q92604 370 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 MOCOSQ96EN8 888 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 UHRF1Q96T88 793 aaPredicted RBP13.44□□□□□ -0.26
CALD1-205ENST00000422748 EBNA1BP2Q99848 306 aaKnown RBP13.44□□□□□ -0.26
CALD1-205ENST00000422748 ADI1Q9BV57 179 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 ACSS2Q9NR19 701 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 ANKMY1Q9P2S6 941 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 SFMBT1Q9UHJ3 866 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 PCDHA11Q9Y5I1 949 aa13.44□□□□□ -0.26
CALD1-205ENST00000422748 TNFRSF10AO00220 468 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 VNN1O95497 513 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 CHEK2O96017 543 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 MMP10P09238 476 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 TNNI1P19237 187 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 SLC7A1P30825 629 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 POLR2BP30876 1174 aaKnown RBP13.43□□□□□ -0.26
CALD1-205ENST00000422748 NME5P56597 212 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 GRSF1Q12849 480 aaKnown RBP eCLIP13.43□□□□□ -0.26
CALD1-205ENST00000422748 MMAAQ8IVH4 418 aaKnown RBP13.43□□□□□ -0.26
CALD1-205ENST00000422748 TTLL6Q8N841 843 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 LRRN4Q8WUT4 740 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 SLC7A3Q8WY07 619 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 ZNF347Q96SE7 839 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 VRTNQ9H8Y1 702 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 GREB1LQ9C091 1923 aaPredicted RBP13.43□□□□□ -0.26
CALD1-205ENST00000422748 NOTOA8MTQ0 251 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 TADA2AO75478 443 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 STAM2O75886 525 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 MX2P20592 715 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 PROZP22891 400 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 MPSTP25325 297 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 YAP1P46937 504 aaKnown RBP13.43□□□□□ -0.26
CALD1-205ENST00000422748 MERTKQ12866 999 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 RALGDSQ12967 914 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 DNASE1L3Q13609 305 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 INAVAQ3KP66 663 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 PPP2R2DQ66LE6 453 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 ZNF534Q76KX8 674 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 ITIH5Q86UX2 942 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 CBR4Q8N4T8 237 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 CPSF7Q8N684 471 aaKnown RBP13.43□□□□□ -0.26
CALD1-205ENST00000422748 ANKFN1Q8N957 763 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 CAPSLQ8WWF8 208 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 FBXL20Q96IG2 436 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 ZNF385DQ9H6B1 395 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 SUCOQ9UBS9 1254 aaKnown RBP13.43□□□□□ -0.26
CALD1-205ENST00000422748 PCDHGC3Q9UN70 934 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 ATP11BQ9Y2G3 1177 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 TCAF1Q9Y4C2 921 aa13.43□□□□□ -0.26
CALD1-205ENST00000422748 TCAF2A6NFQ2 919 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 PPEF1O14829 653 aaPredicted RBP13.42□□□□□ -0.26
CALD1-205ENST00000422748 TPPPO94811 219 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 EPHX2P34913 555 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 PSME3P61289 254 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 TAP1Q03518 808 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 E2F2Q14209 437 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 ZACNQ401N2 412 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 OFCC1Q8IZS5 231 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 LRRC39Q96DD0 335 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 SH3YL1Q96HL8 342 aaPredicted RBP13.42□□□□□ -0.26
CALD1-205ENST00000422748 SDCBP2Q9H190 292 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 PRR12Q9ULL5 1215 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 PCDHGA7Q9Y5G6 932 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 FER1L6Q2WGJ9 1857 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 PTPRJQ12913 1337 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 TCRBV3S1A0A5B6 114 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms