RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 TBC1D3IA0A087WXS9 549 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 TBC1D3EA0A087X179 549 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 TBC1D3KA0A087X1G2 549 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 TBC1D3FA6NER0 549 aaPredicted RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 ZSCAN5CA6NGD5 496 aaPredicted RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 FAM47DPA6NHR8 397 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 C2CD4BA6NLJ0 364 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 EIF3CLB5ME19 914 aaKnown RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 TBC1D3LB9A6J9 549 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 RNGTTO60942 597 aaKnown RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 GJB3O75712 270 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 SERPINC1P01008 464 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 TPM3P06753 285 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 TBC1D3HP0C7X1 549 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 TNFAIP3P21580 790 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 GPD1P21695 349 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 ADRA1BP35368 520 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 CTSOP43234 321 aaPredicted RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 PSMD8P48556 350 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 STK19P49842 368 aaPredicted RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 KLK7P49862 253 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 ATP11AP98196 1134 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 NCAPHQ15003 741 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 CDO1Q16878 200 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 EFHC2Q5JST6 749 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 TBC1D3GQ6DHY5 549 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 TBC1D3CQ6IPX1 549 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 CAVIN1Q6NZI2 390 aaKnown RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 DNAJC24Q6P3W2 148 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 DCUN1D2Q6PH85 259 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 NCEH1Q6PIU2 408 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 CIR1Q86X95 450 aaPredicted RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 FAM131BQ86XD5 332 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 PLPP6Q8IY26 295 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 ZNF683Q8IZ20 524 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 TBC1D3Q8IZP1 549 aaPredicted RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 PCDH20Q8N6Y1 951 aaKnown RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 DEFB124Q8NES8 71 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 TMIEQ8NEW7 156 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 C1orf216Q8TAB5 229 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 SLC30A5Q8TAD4 765 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 FAM174AQ8TBP5 190 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 SLC20A1Q8WUM9 679 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 CENPIQ92674 756 aaPredicted RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 NTAN1Q96AB6 310 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 ISG20Q96AZ6 181 aaKnown RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 ALG14Q96F25 216 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 TRIM11Q96F44 468 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 EIF3CQ99613 913 aaKnown RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 AGPAT1Q99943 283 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 MAGEH1Q9H213 219 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 PREBQ9HCU5 417 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 ATP13A1Q9HD20 1204 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 TM9SF3Q9HD45 589 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 RTN4Q9NQC3 1192 aaKnown RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 TM7SF3Q9NS93 570 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 TMEM63CQ9P1W3 806 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 APOBEC2Q9Y235 224 aaKnown RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 ANKRD6Q9Y2G4 727 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 OR51B4Q9Y5P0 310 aa8.86□□□□□ -0.99
MDC1-204ENST00000422266 BZW2Q9Y6E2 419 aaKnown RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 MUC22E2RYF6 1773 aaPredicted RBP8.86□□□□□ -0.99
MDC1-204ENST00000422266 ASCC3Q8N3C0 2202 aaKnown RBP8.85□□□□□ -0.99
MDC1-204ENST00000422266 PCNX2A6NKB5 2137 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 GOLGA6L19H0YKK7 550 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 VILLO15195 856 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 CDK4P11802 303 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 GZMAP12544 262 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 SRCP12931 536 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 CD59P13987 128 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 RHOQP17081 205 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 CHRNB2P17787 502 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 CD38P28907 300 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 L1CAMP32004 1257 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 GRK6P43250 576 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 ARRB1P49407 418 aaPredicted RBP8.85□□□□□ -0.99
MDC1-204ENST00000422266 CSNK1EP49674 416 aaKnown RBP8.85□□□□□ -0.99
MDC1-204ENST00000422266 CCT8P50990 548 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 ZNF135P52742 658 aaPredicted RBP8.85□□□□□ -0.99
MDC1-204ENST00000422266 ZNF143P52747 638 aaPredicted RBP8.85□□□□□ -0.99
MDC1-204ENST00000422266 ADPRHP54922 357 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 SIM1P81133 766 aaPredicted RBP8.85□□□□□ -0.99
MDC1-204ENST00000422266 GNA12Q03113 381 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 SCAPQ12770 1279 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 POLD3Q15054 466 aaPredicted RBP8.85□□□□□ -0.99
MDC1-204ENST00000422266 KLHL40Q2TBA0 621 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 HLA-BQ31612 363 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 CCDC14Q49A88 953 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 SETMARQ53H47 684 aaPredicted RBP8.85□□□□□ -0.99
MDC1-204ENST00000422266 ALFQ53S48 1182 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 OTUD1Q5VV17 481 aaPredicted RBP8.85□□□□□ -0.99
MDC1-204ENST00000422266 ACAD10Q6JQN1 1059 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 RWDD4Q6NW29 188 aaKnown RBP8.85□□□□□ -0.99
MDC1-204ENST00000422266 MON1BQ7L1V2 547 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 APTXQ7Z2E3 356 aaKnown RBP8.85□□□□□ -0.99
MDC1-204ENST00000422266 TFAP2DQ7Z6R9 452 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 SLFN11Q7Z7L1 901 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 C14orf80Q86SX3 495 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 GLRX5Q86SX6 157 aa8.85□□□□□ -0.99
MDC1-204ENST00000422266 VPS36Q86VN1 386 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms