RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 ANKRD7Q92527 254 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 ZCCHC2Q9C0B9 1178 aaKnown RBP9.92□□□□□ -0.82
CMSS1-201ENST00000421999 APODP05090 189 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 CYP2A6P11509 494 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-201ENST00000421999 EPB42P16452 691 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 HSD17B3P37058 310 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 HDAC4P56524 1084 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 SATB1Q01826 763 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 CBX2Q14781 532 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-201ENST00000421999 FAM133BQ5BKY9 247 aaKnown RBP9.92□□□□□ -0.82
CMSS1-201ENST00000421999 C6orf10Q5SRN2 563 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 BEND6Q5SZJ8 279 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-201ENST00000421999 SYPL2Q5VXT5 272 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 STRA8Q7Z7C7 330 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 CPA6Q8N4T0 437 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.92□□□□□ -0.82
CMSS1-201ENST00000421999 SLC35F5Q8WV83 523 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 NCLNQ969V3 563 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 TMEM159Q96B96 161 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 KLHL29Q96CT2 875 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 FUBP3Q96I24 572 aaKnown RBP eCLIP9.92□□□□□ -0.82
CMSS1-201ENST00000421999 KLHL5Q96PQ7 755 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 TMEM209Q96SK2 561 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 LGMNQ99538 433 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 YIPF1Q9Y548 306 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 PCDHB9Q9Y5E1 797 aa9.92□□□□□ -0.82
CMSS1-201ENST00000421999 CCNB1P14635 433 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 POU4F1Q01851 419 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 GABPB1Q06547 395 aaPredicted RBP9.91□□□□□ -0.82
CMSS1-201ENST00000421999 UBXN2BQ14CS0 331 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 PYROXD2Q8N2H3 581 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 CXorf40AQ8TE69 158 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 ATP6V1G3Q96LB4 118 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 MLPHQ9BV36 600 aaPredicted RBP9.91□□□□□ -0.82
CMSS1-201ENST00000421999 CXCL16Q9H2A7 254 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 ARHGEF4Q9NR80 690 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 DUS2Q9NX74 493 aaKnown RBP9.91□□□□□ -0.82
CMSS1-201ENST00000421999 WHRNQ9P202 907 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 R3HDM2Q9Y2K5 976 aaKnown RBP9.91□□□□□ -0.82
CMSS1-201ENST00000421999 EVPLQ92817 2033 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 SUPT7LO94864 414 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 STAU1O95793 577 aaKnown RBP9.91□□□□□ -0.82
CMSS1-201ENST00000421999 DNTTP04053 509 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 ITGB1P05556 798 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 EPHX1P07099 455 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 MYL2P10916 166 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 KRT4P19013 534 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 MGAT1P26572 445 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 SESN3P58005 492 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 HSP90AA5PQ58FG0 334 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TMEM110Q86TL2 294 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 MYO1HQ8N1T3 1032 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 SLC4A5Q9BY07 1137 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 VCX3BQ9H321 246 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 ATP13A3Q9H7F0 1226 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 KIAA1522Q9P206 1035 aaPredicted RBP9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TBC1D3DA0A087WVF3 549 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TBC1D3IA0A087WXS9 549 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TBC1D3EA0A087X179 549 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TBC1D3KA0A087X1G2 549 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TBC1D3FA6NER0 549 aaPredicted RBP9.91□□□□□ -0.82
CMSS1-201ENST00000421999 SLC38A8A6NNN8 435 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TBC1D3LB9A6J9 549 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 LIASO43766 372 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 CLDN11O75508 207 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TBX18O95935 607 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 FAM153BP0C7A2 387 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TBC1D3HP0C7X1 549 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 STMN1P16949 149 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 CALRP27797 417 aaKnown RBP9.91□□□□□ -0.82
CMSS1-201ENST00000421999 GPR15P49685 360 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 CAMK2GQ13555 558 aaPredicted RBP9.91□□□□□ -0.82
CMSS1-201ENST00000421999 FAM153CQ494X1 144 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 MPPE1Q53F39 396 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TPGS2Q68CL5 300 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TBC1D3GQ6DHY5 549 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TBC1D3CQ6IPX1 549 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 HFE2Q6ZVN8 426 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TAC4Q86UU9 113 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 FAM126BQ8IXS8 530 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TBC1D3Q8IZP1 549 aaPredicted RBP9.91□□□□□ -0.82
CMSS1-201ENST00000421999 CCDC185Q8N715 623 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 SMOQ99835 787 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 ZNF670Q9BS34 389 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TACO1Q9BSH4 297 aaKnown RBP9.91□□□□□ -0.82
CMSS1-201ENST00000421999 UNKQ9C0B0 810 aaKnown RBP9.91□□□□□ -0.82
CMSS1-201ENST00000421999 SEMA4AQ9H3S1 761 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 GPAMQ9HCL2 828 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 IL23AQ9NPF7 189 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 EPS15L1Q9UBC2 864 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 F8W810 466 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 PPFIA2O75334 1257 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 TCF4P15884 667 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 PECAM1P16284 738 aaPredicted RBP9.91□□□□□ -0.82
CMSS1-201ENST00000421999 PSMB4P28070 264 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 KLHL23Q8NBE8 558 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 SLC9A7Q96T83 725 aa9.91□□□□□ -0.82
CMSS1-201ENST00000421999 PABPC3Q9H361 631 aaKnown RBP9.91□□□□□ -0.82
CMSS1-201ENST00000421999 EML4Q9HC35 981 aaKnown RBP9.91□□□□□ -0.82
CMSS1-201ENST00000421999 GRID1Q9ULK0 1009 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms