RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 CDH4P55283 916 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 UBE2HP62256 183 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 CNTN1Q12860 1018 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 OVGP1Q12889 678 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 DNAJC3Q13217 504 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 STAT4Q14765 748 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 AGBL4Q5VU57 503 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 C14orf80Q86SX3 495 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 SLC47A2Q86VL8 602 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 IQCHQ86VS3 1027 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 TRIM69Q86WT6 500 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 IRF2BP1Q8IU81 584 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 SH2D3CQ8N5H7 860 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 MLKLQ8NB16 471 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 ZNF397Q8NF99 534 aaPredicted RBP14.82□□□□□ -0.04
PAF1-202ENST00000416728 HNRNPLLQ8WVV9 542 aaKnown RBP14.82□□□□□ -0.04
PAF1-202ENST00000416728 TMEM131Q92545 1883 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 TKTL2Q9H0I9 626 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 PDCL3Q9H2J4 239 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 WDCPQ9H6R7 721 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 SIX2Q9NPC8 291 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 SCUBE2Q9NQ36 999 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 PLCB1Q9NQ66 1216 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 PIGVQ9NUD9 493 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 ARHGAP20Q9P2F6 1191 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 AJAP1Q9UKB5 411 aaPredicted RBP14.82□□□□□ -0.04
PAF1-202ENST00000416728 STAP1Q9ULZ2 295 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 HS3ST2Q9Y278 367 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 FARP1Q9Y4F1 1045 aaPredicted RBP14.82□□□□□ -0.04
PAF1-202ENST00000416728 PLXNA2O75051 1894 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 ANKRD11Q6UB99 2663 aaPredicted RBP14.81□□□□□ -0.04
PAF1-202ENST00000416728 E9PAM4 449 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 RHOCP08134 193 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 PNMA6AP0CW24 399 aaPredicted RBP14.81□□□□□ -0.04
PAF1-202ENST00000416728 JUPP14923 745 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 CLCN1P35523 988 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 ACADVLP49748 655 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 BPIFB4P59827 614 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 RNASE9P60153 205 aaKnown RBP14.81□□□□□ -0.04
PAF1-202ENST00000416728 KRT83P78385 493 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 BNIP3Q12983 259 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 MAN2A1Q16706 1144 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 C5orf22Q49AR2 442 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 SETMARQ53H47 684 aaPredicted RBP14.81□□□□□ -0.04
PAF1-202ENST00000416728 BRMS1LQ5PSV4 323 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 SFMBT2Q5VUG0 894 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 OTUD1Q5VV17 481 aaPredicted RBP14.81□□□□□ -0.04
PAF1-202ENST00000416728 SPATS2Q86XZ4 545 aaKnown RBP14.81□□□□□ -0.04
PAF1-202ENST00000416728 ATP11CQ8NB49 1132 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 CCDC114Q96M63 670 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 NPY6RQ99463 290 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 C2orf49Q9BVC5 232 aaPredicted RBP14.81□□□□□ -0.04
PAF1-202ENST00000416728 PREBQ9HCU5 417 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 ARHGEF38Q9NXL2 777 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.81□□□□□ -0.04
PAF1-202ENST00000416728 PAXBP1Q9Y5B6 917 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 APC2O95996 2303 aa14.81□□□□□ -0.04
PAF1-202ENST00000416728 PTPRBP23467 1997 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 ATRXP46100 2492 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 PRAMEF26H0Y7S4 382 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 CNTN5O94779 1100 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 ADCY5O95622 1261 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 F9P00740 461 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 SRCP12931 536 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 CXCR3P49682 368 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 SULT1E1P49888 294 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 ALFQ53S48 1182 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 LRRC31Q6UY01 552 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 FAM114A1Q8IWE2 563 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 FAM71AQ8IYT1 594 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 TMEM35BQ8NCS4 154 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 VPS51Q9UID3 782 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 ACACAQ13085 2346 aa14.8□□□□□ -0.04
PAF1-202ENST00000416728 KPNA3O00505 521 aaPredicted RBP14.79□□□□□ -0.04
PAF1-202ENST00000416728 SNAP91O60641 907 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 MT-CO1P00395 513 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 PRKCSHP14314 528 aaPredicted RBP14.79□□□□□ -0.04
PAF1-202ENST00000416728 TFE3P19532 575 aaPredicted RBP14.79□□□□□ -0.04
PAF1-202ENST00000416728 CLDN6P56747 220 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 DEUP1Q05D60 604 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 CCDC15Q0P6D6 951 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 RAPGEF1Q13905 1077 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 C6orf118Q5T5N4 469 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 FAM102AQ5T9C2 384 aaPredicted RBP14.79□□□□□ -0.04
PAF1-202ENST00000416728 PIP5KL1Q5T9C9 394 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 SETD3Q86TU7 594 aaPredicted RBP14.79□□□□□ -0.04
PAF1-202ENST00000416728 DCAF4L2Q8NA75 395 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 TSC1Q92574 1164 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 NXPE2Q96DL1 559 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 PGAP3Q96FM1 320 aaPredicted RBP14.79□□□□□ -0.04
PAF1-202ENST00000416728 LRIG1Q96JA1 1093 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 PSMB7Q99436 277 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 NDST4Q9H3R1 872 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 ANLNQ9NQW6 1124 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 DYRK4Q9NR20 520 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 TMEM51Q9NW97 253 aa14.79□□□□□ -0.04
PAF1-202ENST00000416728 COL5A1P20908 1838 aaPredicted RBP14.79□□□□□ -0.04
PAF1-202ENST00000416728 I6L893 689 aaPredicted RBP14.78□□□□□ -0.04
PAF1-202ENST00000416728 K7ERQ8 282 aa14.78□□□□□ -0.04
PAF1-202ENST00000416728 RNGTTO60942 597 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms