RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 FAM90A7PA6NKC0 464 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 FAM90A22PA8MWA6 464 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 FAM90A12PA8MX19 464 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 FAM90A23PA8MXZ1 464 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 INO80B-WBP1J3KQ70 363 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 KLK10O43240 276 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 PRF1P14222 555 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 PRKCHP24723 683 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 MAPK9P45984 424 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 CYP2J2P51589 502 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 PMPCAQ10713 525 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 TBL3Q12788 808 aaKnown RBP4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 TWIST1Q15672 202 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 HSP90AB4PQ58FF6 505 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 FAM171A1Q5VUB5 890 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZKSCAN2Q63HK3 967 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 ATG16L1Q676U5 607 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZNF425Q6IV72 752 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 GJB7Q6PEY0 223 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 ARFGAP1Q8N6T3 406 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 NANOGP1Q8N7R0 232 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 MAELQ96JY0 434 aaKnown RBP4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZNF778Q96MU6 729 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 KRTAP17-1Q9BYP8 105 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 CTDSP1Q9GZU7 261 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 STN1Q9H668 368 aaKnown RBP4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 ACTR5Q9H9F9 607 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZNF304Q9HCX3 659 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 TLR8Q9NR97 1041 aaKnown RBP4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 HEY2Q9UBP5 337 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 FBXO40Q9UH90 709 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 PCDHA12Q9UN75 941 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 AFG3L2Q9Y4W6 797 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 CLDN16Q9Y5I7 305 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 HOXC11O43248 304 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 DDAH2O95865 285 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 FGF2P09038 288 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 FCGR2AP12318 317 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 CPA1P15085 419 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 CIITAP33076 1130 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 HNF1BP35680 557 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 SLC16A2P36021 539 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZNF81P51508 661 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 PKP1Q13835 747 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 BYSLQ13895 437 aaKnown RBP4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 ETFDHQ16134 617 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 C6orf10Q5SRN2 563 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 AAGABQ6PD74 315 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 IGFN1Q86VF2 1251 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 CERS3Q8IU89 383 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 SLC25A41Q8N5S1 370 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 SCAIQ8N9R8 606 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 LSM14AQ8ND56 463 aaKnown RBP4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 EME1Q96AY2 570 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 TEFMQ96QE5 360 aaKnown RBP4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 PHF7Q9BWX1 381 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 NPLQ9BXD5 320 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 SPRTNQ9H040 489 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 TAOK3Q9H2K8 898 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 TASP1Q9H6P5 420 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 ACAD9Q9H845 621 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 PNRC2Q9NPJ4 139 aaKnown RBP4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 SEMA4BQ9NPR2 832 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZDHHC7Q9NXF8 308 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 HDAC6Q9UBN7 1215 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 SUFUQ9UMX1 484 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 HS3ST3B1Q9Y662 390 aa4.14□□□□□ -1.75
HMGB1P11-201ENST00000413899 A0A1B0GVC2 190 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 CCDC189A1A4V9 331 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 GAGE12JA6NER3 117 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 PEX12O00623 359 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 SOCS2O14508 198 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 ANP32CO43423 234 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 IFNA2P01563 188 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 WEE2P0C1S8 567 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 TMEM191BP0C7N4 346 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 CYP19A1P11511 503 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 ME1P48163 572 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 TRPC3Q13507 836 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 LAMB3Q13751 1172 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 IL13RA2Q14627 380 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 RABEP1Q15276 862 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 INPP5JQ15735 1006 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 ALG10Q5BKT4 473 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 ALG10BQ5I7T1 473 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 SH2D4BQ5SQS7 431 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 NAA35Q5VZE5 725 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 RETSATQ6NUM9 610 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 CCDC25Q86WR0 208 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 TMTC1Q8IUR5 882 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 FAM185AQ8N0U4 392 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 MMP21Q8N119 569 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 SETD9Q8NE22 299 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 IL17REQ8NFR9 667 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 FAR1Q8WVX9 515 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 CENPIQ92674 756 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 CLSTN3Q9BQT9 956 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms