RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 ASLP04424 464 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 SRPRAP08240 638 aaKnown RBP7.9□□□□□ -1.14
CPSF4-202ENST00000412686 TNNT1P13805 278 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 ERCC2P18074 760 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 AMPD1P23109 780 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 HOXA6P31267 233 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 NBL1P41271 181 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 NOP2P46087 812 aaKnown RBP7.9□□□□□ -1.14
CPSF4-202ENST00000412686 MAPKAPK2P49137 400 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 ARSEP51690 589 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 CDH6P55285 790 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 SLC12A1Q13621 1099 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 DPYSQ14117 519 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 STARD3Q14849 445 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 DPYSL2Q16555 572 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 IL31Q6EBC2 164 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 KIAA1324Q6UXG2 1013 aaKnown RBP7.9□□□□□ -1.14
CPSF4-202ENST00000412686 RFX8Q6ZV50 586 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 POLNQ7Z5Q5 900 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 TMPRSS6Q8IU80 811 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 RHOT2Q8IXI1 618 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 DCAF4L2Q8NA75 395 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 FRS2Q8WU20 508 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 PTPRN2Q92932 1015 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 ARHGEF2Q92974 986 aaKnown RBP7.9□□□□□ -1.14
CPSF4-202ENST00000412686 HMCESQ96FZ2 354 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 ACE2Q9BYF1 805 aaPredicted RBP7.9□□□□□ -1.14
CPSF4-202ENST00000412686 PCDH18Q9HCL0 1135 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 ETNK2Q9NVF9 386 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 EBF1Q9UH73 591 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 PCDHGA2Q9Y5H1 932 aa7.9□□□□□ -1.14
CPSF4-202ENST00000412686 WASH4PA8MWX3 477 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 RASA4BC9J798 803 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 H3BRJ5 948 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 RNF103O00237 685 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 NPC1O15118 1278 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 DAPK3O43293 454 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 RASA4O43374 803 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 BNIP3LO60238 219 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 ALDH1A2O94788 518 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 MAP3K6O95382 1288 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 SRCP12931 536 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 COMTP21964 271 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 IL4RP24394 825 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 MAN1A1P33908 653 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 MARCKSL1P49006 195 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 VAV2P52735 878 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 METAP1P53582 386 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 OXCT1P55809 520 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 GSDMDP57764 484 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 ST8SIA6P61647 398 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 CCZ1BP86790 482 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 CCZ1P86791 482 aaPredicted RBP7.89□□□□□ -1.15
CPSF4-202ENST00000412686 CAMK2BQ13554 666 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 CAMK2GQ13555 558 aaPredicted RBP7.89□□□□□ -1.15
CPSF4-202ENST00000412686 KRT81Q14533 505 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 POLD3Q15054 466 aaPredicted RBP7.89□□□□□ -1.15
CPSF4-202ENST00000412686 TCEAL1Q15170 157 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 LLGL1Q15334 1064 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 HADHQ16836 314 aaKnown RBP7.89□□□□□ -1.15
CPSF4-202ENST00000412686 HNRNPA1L2Q32P51 320 aaKnown RBP7.89□□□□□ -1.15
CPSF4-202ENST00000412686 MAP7D1Q3KQU3 841 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 ACCSLQ4AC99 568 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 BOLA3Q53S33 107 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 C9orf64Q5T6V5 341 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 ACBD5Q5T8D3 534 aaPredicted RBP7.89□□□□□ -1.15
CPSF4-202ENST00000412686 ARHGAP36Q6ZRI8 547 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 PRR23BQ6ZRT6 265 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 Q6ZVU0 165 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 ASCL5Q7RTU5 278 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 KIAA1328Q86T90 577 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 KBTBD6Q86V97 674 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 ZNF354CQ86Y25 554 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 PSTKQ8IV42 348 aaKnown RBP7.89□□□□□ -1.15
CPSF4-202ENST00000412686 ARHGAP12Q8IWW6 846 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 STK40Q8N2I9 435 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 SH2D3CQ8N5H7 860 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 DEFB119Q8N690 84 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 ATP11CQ8NB49 1132 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 OR2T3Q8NH03 318 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 LRRN4Q8WUT4 740 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 TEKT4Q8WW24 435 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 GAB3Q8WWW8 586 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 RAPGEF5Q92565 580 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 TSC1Q92574 1164 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 CSPG4P5Q96PW8 444 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 C2orf49Q9BVC5 232 aaPredicted RBP7.89□□□□□ -1.15
CPSF4-202ENST00000412686 FAM126AQ9BYI3 521 aaPredicted RBP7.89□□□□□ -1.15
CPSF4-202ENST00000412686 SLC39A8Q9C0K1 460 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 TNKS2Q9H2K2 1166 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 LRRC19Q9H756 370 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 CATSPERBQ9H7T0 1116 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 MBD1Q9UIS9 605 aaPredicted RBP7.89□□□□□ -1.15
CPSF4-202ENST00000412686 SLC25A13Q9UJS0 675 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 CYP8B1Q9UNU6 501 aa7.89□□□□□ -1.15
CPSF4-202ENST00000412686 FCF1Q9Y324 198 aaKnown RBP7.89□□□□□ -1.15
CPSF4-202ENST00000412686 NUP205Q92621 2012 aa7.88□□□□□ -1.15
CPSF4-202ENST00000412686 PLXND1Q9Y4D7 1925 aa7.88□□□□□ -1.15
CPSF4-202ENST00000412686 IGHV1OR15-9A0A0B4J2B8 117 aa7.88□□□□□ -1.15
CPSF4-202ENST00000412686 CCDC163A0A0D9SF12 145 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms