RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 TTC31Q49AM3 519 aaPredicted RBP8.41□□□□□ -1.06
RPE-204ENST00000411934 USP39Q53GS9 565 aaKnown RBP8.41□□□□□ -1.06
RPE-204ENST00000411934 INO80DQ53TQ3 878 aaPredicted RBP8.41□□□□□ -1.06
RPE-204ENST00000411934 RAD9BQ6WBX8 426 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 DSG4Q86SJ6 1040 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 LRRC8AQ8IWT6 810 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 RHOT1Q8IXI2 618 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 APCDD1Q8J025 514 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 SYCE1Q8N0S2 351 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 PYROXD2Q8N2H3 581 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 SH2D3CQ8N5H7 860 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 CCDC33Q8N5R6 958 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 PCDH20Q8N6Y1 951 aaKnown RBP8.41□□□□□ -1.06
RPE-204ENST00000411934 OR52K2Q8NGK3 314 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 GAB3Q8WWW8 586 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 TSC1Q92574 1164 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 ATOH1Q92858 354 aaPredicted RBP8.41□□□□□ -1.06
RPE-204ENST00000411934 FAF2Q96CS3 445 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 LOXL4Q96JB6 756 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 HHIPQ96QV1 700 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 ACOX2Q99424 681 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 PCED1AQ9H1Q7 454 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 PCDH18Q9HCL0 1135 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 ATP13A1Q9HD20 1204 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.41□□□□□ -1.06
RPE-204ENST00000411934 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.41□□□□□ -1.06
RPE-204ENST00000411934 USP36Q9P275 1121 aaKnown RBP8.41□□□□□ -1.06
RPE-204ENST00000411934 BCCIPQ9P287 314 aaKnown RBP eCLIP8.41□□□□□ -1.06
RPE-204ENST00000411934 PCSK1NQ9UHG2 260 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 VPS51Q9UID3 782 aa8.41□□□□□ -1.06
RPE-204ENST00000411934 A0A0D9SEW6 157 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 MAP3K13O43283 966 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 DAPK3O43293 454 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 KRT86O43790 486 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 SPOPO43791 374 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 RPP40O75818 363 aaKnown RBP8.4□□□□□ -1.06
RPE-204ENST00000411934 ADH1BP00325 375 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 SRCP12931 536 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 ZFXP17010 805 aaPredicted RBP8.4□□□□□ -1.06
RPE-204ENST00000411934 GOT1P17174 413 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 ERCC2P18074 760 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 GABRG2P18507 467 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 NDUFV2P19404 249 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 P2RY2P41231 377 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 ARSEP51690 589 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 COPAP53621 1224 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 CDH6P55285 790 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 KIF5AQ12840 1032 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 SERINC3Q13530 473 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 KRT81Q14533 505 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 MESDQ14696 234 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 RFTN1Q14699 578 aaPredicted RBP8.4□□□□□ -1.06
RPE-204ENST00000411934 CA9Q16790 459 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 SMTNL2Q2TAL5 461 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 PPP6R3Q5H9R7 873 aaPredicted RBP8.4□□□□□ -1.06
RPE-204ENST00000411934 AFMIDQ63HM1 303 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 ZNF776Q68DI1 518 aaPredicted RBP8.4□□□□□ -1.06
RPE-204ENST00000411934 IL31Q6EBC2 164 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 ANO7Q6IWH7 933 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 C22orf39Q6P5X5 142 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 TMCO3Q6UWJ1 677 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 SLC36A4Q6YBV0 504 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 USP30Q70CQ3 517 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 KIAA1328Q86T90 577 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 KBTBD6Q86V97 674 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 RNF10Q8N5U6 811 aaKnown RBP8.4□□□□□ -1.06
RPE-204ENST00000411934 TPCN2Q8NHX9 752 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 FRS2Q8WU20 508 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 CYB5D2Q8WUJ1 264 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 HSPH1Q92598 858 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 PRCCQ92733 491 aaPredicted RBP8.4□□□□□ -1.06
RPE-204ENST00000411934 FAM131CQ96AQ9 280 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 LRIG1Q96JA1 1093 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 PDLIM2Q96JY6 352 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 ZC3H10Q96K80 434 aaKnown RBP8.4□□□□□ -1.06
RPE-204ENST00000411934 BTBD6Q96KE9 485 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 MRGPRX1Q96LB2 322 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 ZNF599Q96NL3 588 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 CSPG4P5Q96PW8 444 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 RSPH9Q9H1X1 276 aaPredicted RBP8.4□□□□□ -1.06
RPE-204ENST00000411934 LRRC19Q9H756 370 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 PRSS16Q9NQE7 514 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 C2orf42Q9NWW7 574 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 CWC15Q9P013 229 aaKnown RBP8.4□□□□□ -1.06
RPE-204ENST00000411934 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.4□□□□□ -1.06
RPE-204ENST00000411934 REXO2Q9Y3B8 237 aaKnown RBP8.4□□□□□ -1.06
RPE-204ENST00000411934 SNX10Q9Y5X0 201 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 RAD54BQ9Y620 910 aa8.4□□□□□ -1.06
RPE-204ENST00000411934 ATG2BQ96BY7 2078 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 EML5Q05BV3 1969 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 CCDC66A2RUB6 948 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 RASA4BC9J798 803 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 C1QTNF3-AMACRE9PGA6 284 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 CBX4O00257 560 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 MCF2LO15068 1137 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 RASA4O43374 803 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 KDELR3O43731 214 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 FOXD2O60548 495 aaPredicted RBP8.39□□□□□ -1.07
RPE-204ENST00000411934 BUB1BO60566 1050 aaPredicted RBP8.39□□□□□ -1.07
RPE-204ENST00000411934 LRP3O75074 770 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms