RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 MAPK15Q8TD08 544 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 NDRG1Q92597 394 aaKnown RBP17.01■□□□□ 0.31
LIMS2-208ENST00000410011 DDX50Q9BQ39 737 aaKnown RBP17.01■□□□□ 0.31
LIMS2-208ENST00000410011 SPATA16Q9BXB7 569 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 CYP4F11Q9HBI6 524 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 VTI1BQ9UEU0 232 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 BCAP29Q9UHQ4 241 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 FBXW11Q9UKB1 542 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 PSMD13Q9UNM6 376 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 GABRDO14764 452 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 ZBTB24O43167 697 aaPredicted RBP17.01■□□□□ 0.31
LIMS2-208ENST00000410011 SNUPNO95149 360 aaKnown RBP17.01■□□□□ 0.31
LIMS2-208ENST00000410011 FYNP06241 537 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 PABPC4LP0CB38 370 aaKnown RBP17.01■□□□□ 0.31
LIMS2-208ENST00000410011 RAG1P15918 1043 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 PTPN1P18031 435 aaKnown RBP17.01■□□□□ 0.31
LIMS2-208ENST00000410011 ERFP50548 548 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 RPL14P50914 215 aaKnown RBP17.01■□□□□ 0.31
LIMS2-208ENST00000410011 GALNT2Q10471 571 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 HERC3Q15034 1050 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 ANO4Q32M45 955 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 HSP90AA5PQ58FG0 334 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 LIPMQ5VYY2 423 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 CLEC20AQ6ZU45 233 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 OSTM1Q86WC4 334 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 SIX6OS1Q8N1H7 587 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 DPF3Q92784 378 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 OPTNQ96CV9 577 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 VPS39Q96JC1 886 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 OXCT2Q9BYC2 517 aaPredicted RBP17.01■□□□□ 0.31
LIMS2-208ENST00000410011 CDHR5Q9HBB8 845 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 RGS17Q9UGC6 210 aaPredicted RBP17.01■□□□□ 0.31
LIMS2-208ENST00000410011 DICER1Q9UPY3 1922 aaKnown RBP17■□□□□ 0.31
LIMS2-208ENST00000410011 MBLAC1A4D2B0 266 aaPredicted RBP17■□□□□ 0.31
LIMS2-208ENST00000410011 AKAP5P24588 427 aa17■□□□□ 0.31
LIMS2-208ENST00000410011 LRPAP1P30533 357 aa17■□□□□ 0.31
LIMS2-208ENST00000410011 LPCAT4Q643R3 524 aa17■□□□□ 0.31
LIMS2-208ENST00000410011 TP53INP2Q8IXH6 220 aa17■□□□□ 0.31
LIMS2-208ENST00000410011 MFSD3Q96ES6 412 aa17■□□□□ 0.31
LIMS2-208ENST00000410011 MLPHQ9BV36 600 aaPredicted RBP17■□□□□ 0.31
LIMS2-208ENST00000410011 C1QTNF1Q9BXJ1 281 aa17■□□□□ 0.31
LIMS2-208ENST00000410011 EPB41L1Q9H4G0 881 aa17■□□□□ 0.31
LIMS2-208ENST00000410011 ZNF385DQ9H6B1 395 aa17■□□□□ 0.31
LIMS2-208ENST00000410011 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.99■□□□□ 0.31
LIMS2-208ENST00000410011 E9PBE3 544 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 FAM72CH0Y354 149 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 DENRO43583 198 aaKnown RBP16.99■□□□□ 0.31
LIMS2-208ENST00000410011 CACNG3O60359 315 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 KLHL41O60662 606 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 BEST1O76090 585 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 SORBS2O94875 1100 aaKnown RBP16.99■□□□□ 0.31
LIMS2-208ENST00000410011 PEX2P28328 305 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 SERPINB6P35237 376 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 SH3BGRP55822 239 aaPredicted RBP16.99■□□□□ 0.31
LIMS2-208ENST00000410011 TPI1P60174 286 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 PRKAA1Q13131 559 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 NME3Q13232 169 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 FAM72AQ5TYM5 149 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 SEL1L3Q68CR1 1132 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 FAM72DQ6L9T8 149 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 ZFP1Q6P2D0 407 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 FAM72BQ86X60 149 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 KYQ8NBH2 561 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 TEKT5Q96M29 485 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 AGAP3Q96P47 875 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 OR52B2Q96RD2 323 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 KIFC1Q9BW19 673 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 ACE2Q9BYF1 805 aaPredicted RBP16.99■□□□□ 0.31
LIMS2-208ENST00000410011 TRIM4Q9C037 500 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 DMAP1Q9NPF5 467 aaPredicted RBP16.99■□□□□ 0.31
LIMS2-208ENST00000410011 NDUFA13Q9P0J0 144 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 F9P00740 461 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 SMPD1P17405 629 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 PIK3R1P27986 724 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 NDUFV1P49821 464 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 AQP4P55087 323 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 IRF9Q00978 393 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 ARL13BQ3SXY8 428 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 NAPEPLDQ6IQ20 393 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 LINC00523Q86TU6 105 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 NETO2Q8NC67 525 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 RNF169Q8NCN4 708 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 PDCD6IPQ8WUM4 868 aaKnown RBP16.99■□□□□ 0.31
LIMS2-208ENST00000410011 CCDC124Q96CT7 223 aaKnown RBP16.99■□□□□ 0.31
LIMS2-208ENST00000410011 OSMRQ99650 979 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 SHCBP1LQ9BZQ2 653 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 RHOJQ9H4E5 214 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 CNGB3Q9NQW8 809 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 MAN1C1Q9NR34 630 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 C20orf96Q9NUD7 363 aaPredicted RBP16.99■□□□□ 0.31
LIMS2-208ENST00000410011 TLK1Q9UKI8 766 aa16.99■□□□□ 0.31
LIMS2-208ENST00000410011 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.98■□□□□ 0.31
LIMS2-208ENST00000410011 USP12O75317 370 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 CAPNS1P04632 268 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 TFEBP19484 476 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 GMPRP36959 345 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 TKTL1P51854 596 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 DAOAP59103 153 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 SOX4Q06945 474 aaPredicted RBP16.98■□□□□ 0.31
LIMS2-208ENST00000410011 CDH17Q12864 832 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms