RNA–Protein interactions for RNA: ENST00000409712.5

SUMO1-209, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 2 BASIC

Gene SUMO1, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-209ENST00000409712 MTF2Q9Y483 593 aaPredicted RBP17■□□□□ 0.31
SUMO1-209ENST00000409712 SHROOM3Q8TF72 1996 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 BDP1A6H8Y1 2624 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 ZSCAN5CA6NGD5 496 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-209ENST00000409712 APOC4-APOC2K7ER74 178 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 CES2O00748 559 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 NPC1O15118 1278 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 FANCGO15287 622 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 NCAM2O15394 837 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 SNAP91O60641 907 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 ZMPSTE24O75844 475 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 APOC2P02655 101 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 SRPRAP08240 638 aaKnown RBP16.99■□□□□ 0.31
SUMO1-209ENST00000409712 HNRNPLP14866 589 aaKnown RBP eCLIP16.99■□□□□ 0.31
SUMO1-209ENST00000409712 PRLRP16471 622 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 MX2P20592 715 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 GLDCP23378 1020 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 CXCR5P32302 372 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 MRPS21P82921 87 aaKnown RBP16.99■□□□□ 0.31
SUMO1-209ENST00000409712 ARF5P84085 180 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 SLC10A2Q12908 348 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-209ENST00000409712 KLF1Q13351 362 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-209ENST00000409712 FZD5Q13467 585 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 PAPD7Q5XG87 772 aaKnown RBP16.99■□□□□ 0.31
SUMO1-209ENST00000409712 CWF19L1Q69YN2 538 aaKnown RBP16.99■□□□□ 0.31
SUMO1-209ENST00000409712 RETSATQ6NUM9 610 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 BZW1Q7L1Q6 419 aaKnown RBP16.99■□□□□ 0.31
SUMO1-209ENST00000409712 SLC13A5Q86YT5 568 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-209ENST00000409712 TP53INP2Q8IXH6 220 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 CCDC105Q8IYK2 499 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 KDM1BQ8NB78 822 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 NETO2Q8NC67 525 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 C16orf45Q96MC5 204 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-209ENST00000409712 OLFM3Q96PB7 478 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 OSBPL9Q96SU4 736 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 THAP10Q9P2Z0 257 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-209ENST00000409712 SLC25A13Q9UJS0 675 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 HCN2Q9UL51 889 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 ERVW-1Q9UQF0 538 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 HEY1Q9Y5J3 304 aa16.99■□□□□ 0.31
SUMO1-209ENST00000409712 CBX4O00257 560 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 STK25O00506 426 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 RNF40O75150 1001 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 TUBB4AP04350 444 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 PECAM1P16284 738 aaPredicted RBP16.98■□□□□ 0.31
SUMO1-209ENST00000409712 TCP1P17987 556 aaKnown RBP16.98■□□□□ 0.31
SUMO1-209ENST00000409712 GARSP41250 739 aaKnown RBP16.98■□□□□ 0.31
SUMO1-209ENST00000409712 CTSOP43234 321 aaPredicted RBP16.98■□□□□ 0.31
SUMO1-209ENST00000409712 NUMBP49757 651 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 SEC13P55735 322 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 GEMIN4P57678 1058 aaKnown RBP16.98■□□□□ 0.31
SUMO1-209ENST00000409712 PTPRNQ16849 979 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 HSF5Q4G112 596 aaPredicted RBP16.98■□□□□ 0.31
SUMO1-209ENST00000409712 EGFLAMQ63HQ2 1017 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 NPNTQ6UXI9 565 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 ZNF354CQ86Y25 554 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 ATPAF2Q8N5M1 289 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 ZNF513Q8N8E2 541 aaPredicted RBP16.98■□□□□ 0.31
SUMO1-209ENST00000409712 FLCNQ8NFG4 579 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 USP33Q8TEY7 942 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 CYB5D2Q8WUJ1 264 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 SORCS1Q8WY21 1168 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 P3H4Q92791 437 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 CLDN23Q96B33 292 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 HDAC11Q96DB2 347 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 MRGPRX3Q96LB0 322 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 LMAN1LQ9HAT1 526 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 PDFQ9HBH1 243 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 RBM12Q9NTZ6 932 aaKnown RBP16.98■□□□□ 0.31
SUMO1-209ENST00000409712 PLA2G4CQ9UP65 541 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 HS3ST2Q9Y278 367 aa16.98■□□□□ 0.31
SUMO1-209ENST00000409712 KIF2AO00139 706 aaPredicted RBP16.97■□□□□ 0.31
SUMO1-209ENST00000409712 CEP104O60308 925 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 PRAMEF11O60813 436 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 MAP3K6O95382 1288 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 PDGFBP01127 241 aaPredicted RBP16.97■□□□□ 0.31
SUMO1-209ENST00000409712 CASQ1P31415 396 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 TIE1P35590 1138 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 RPS9P46781 194 aaKnown RBP16.97■□□□□ 0.31
SUMO1-209ENST00000409712 IL10RBQ08334 325 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 SLC20A2Q08357 652 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 ENPP2Q13822 863 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 ZNF234Q14588 700 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 CCDC181Q5TID7 509 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 EMC10Q5UCC4 262 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 SYT10Q6XYQ8 523 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 ARHGAP36Q6ZRI8 547 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 TRMT11Q7Z4G4 463 aaKnown RBP16.97■□□□□ 0.31
SUMO1-209ENST00000409712 RASGEF1CQ8N431 466 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 TTC13Q8NBP0 860 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 MYO19Q96H55 970 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 TSGA13Q96PP4 275 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 BRD8Q9H0E9 1235 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 SP110Q9HB58 689 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 IPO11Q9UI26 975 aaKnown RBP16.97■□□□□ 0.31
SUMO1-209ENST00000409712 TTC7AQ9ULT0 858 aaPredicted RBP16.97■□□□□ 0.31
SUMO1-209ENST00000409712 SIT1Q9Y3P8 196 aa16.97■□□□□ 0.31
SUMO1-209ENST00000409712 MYO18AQ92614 2054 aaKnown RBP16.97■□□□□ 0.31
SUMO1-209ENST00000409712 CKAP5Q14008 2032 aa16.96■□□□□ 0.31
SUMO1-209ENST00000409712 ANTXRLA6NF34 631 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms