RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 ZSCAN5CA6NGD5 496 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-208ENST00000409627 APOC4-APOC2K7ER74 178 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 CES2O00748 559 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 NPC1O15118 1278 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 FANCGO15287 622 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 NCAM2O15394 837 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 SNAP91O60641 907 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 ZMPSTE24O75844 475 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 APOC2P02655 101 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 SRPRAP08240 638 aaKnown RBP16.99■□□□□ 0.31
SUMO1-208ENST00000409627 HNRNPLP14866 589 aaKnown RBP eCLIP16.99■□□□□ 0.31
SUMO1-208ENST00000409627 PRLRP16471 622 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 MX2P20592 715 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 GLDCP23378 1020 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 CXCR5P32302 372 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 MRPS21P82921 87 aaKnown RBP16.99■□□□□ 0.31
SUMO1-208ENST00000409627 ARF5P84085 180 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 SLC10A2Q12908 348 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-208ENST00000409627 KLF1Q13351 362 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-208ENST00000409627 FZD5Q13467 585 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 PAPD7Q5XG87 772 aaKnown RBP16.99■□□□□ 0.31
SUMO1-208ENST00000409627 CWF19L1Q69YN2 538 aaKnown RBP16.99■□□□□ 0.31
SUMO1-208ENST00000409627 RETSATQ6NUM9 610 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 BZW1Q7L1Q6 419 aaKnown RBP16.99■□□□□ 0.31
SUMO1-208ENST00000409627 SLC13A5Q86YT5 568 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-208ENST00000409627 TP53INP2Q8IXH6 220 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 CCDC105Q8IYK2 499 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 KDM1BQ8NB78 822 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 NETO2Q8NC67 525 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 C16orf45Q96MC5 204 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-208ENST00000409627 OLFM3Q96PB7 478 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 OSBPL9Q96SU4 736 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 THAP10Q9P2Z0 257 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-208ENST00000409627 SLC25A13Q9UJS0 675 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 HCN2Q9UL51 889 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 ERVW-1Q9UQF0 538 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 HEY1Q9Y5J3 304 aa16.99■□□□□ 0.31
SUMO1-208ENST00000409627 CBX4O00257 560 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 STK25O00506 426 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 RNF40O75150 1001 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 TUBB4AP04350 444 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 PECAM1P16284 738 aaPredicted RBP16.98■□□□□ 0.31
SUMO1-208ENST00000409627 TCP1P17987 556 aaKnown RBP16.98■□□□□ 0.31
SUMO1-208ENST00000409627 GARSP41250 739 aaKnown RBP16.98■□□□□ 0.31
SUMO1-208ENST00000409627 CTSOP43234 321 aaPredicted RBP16.98■□□□□ 0.31
SUMO1-208ENST00000409627 NUMBP49757 651 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 SEC13P55735 322 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 GEMIN4P57678 1058 aaKnown RBP16.98■□□□□ 0.31
SUMO1-208ENST00000409627 PTPRNQ16849 979 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 HSF5Q4G112 596 aaPredicted RBP16.98■□□□□ 0.31
SUMO1-208ENST00000409627 EGFLAMQ63HQ2 1017 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 NPNTQ6UXI9 565 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 ZNF354CQ86Y25 554 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 ATPAF2Q8N5M1 289 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 ZNF513Q8N8E2 541 aaPredicted RBP16.98■□□□□ 0.31
SUMO1-208ENST00000409627 FLCNQ8NFG4 579 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 USP33Q8TEY7 942 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 CYB5D2Q8WUJ1 264 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 SORCS1Q8WY21 1168 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 P3H4Q92791 437 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 CLDN23Q96B33 292 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 HDAC11Q96DB2 347 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 MRGPRX3Q96LB0 322 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 LMAN1LQ9HAT1 526 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 PDFQ9HBH1 243 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 RBM12Q9NTZ6 932 aaKnown RBP16.98■□□□□ 0.31
SUMO1-208ENST00000409627 PLA2G4CQ9UP65 541 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 HS3ST2Q9Y278 367 aa16.98■□□□□ 0.31
SUMO1-208ENST00000409627 KIF2AO00139 706 aaPredicted RBP16.97■□□□□ 0.31
SUMO1-208ENST00000409627 CEP104O60308 925 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 PRAMEF11O60813 436 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 MAP3K6O95382 1288 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 PDGFBP01127 241 aaPredicted RBP16.97■□□□□ 0.31
SUMO1-208ENST00000409627 CASQ1P31415 396 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 TIE1P35590 1138 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 RPS9P46781 194 aaKnown RBP16.97■□□□□ 0.31
SUMO1-208ENST00000409627 IL10RBQ08334 325 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 SLC20A2Q08357 652 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 ENPP2Q13822 863 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 ZNF234Q14588 700 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 CCDC181Q5TID7 509 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 EMC10Q5UCC4 262 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 SYT10Q6XYQ8 523 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 ARHGAP36Q6ZRI8 547 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 TRMT11Q7Z4G4 463 aaKnown RBP16.97■□□□□ 0.31
SUMO1-208ENST00000409627 RASGEF1CQ8N431 466 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 TTC13Q8NBP0 860 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 MYO19Q96H55 970 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 TSGA13Q96PP4 275 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 BRD8Q9H0E9 1235 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 SP110Q9HB58 689 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 IPO11Q9UI26 975 aaKnown RBP16.97■□□□□ 0.31
SUMO1-208ENST00000409627 TTC7AQ9ULT0 858 aaPredicted RBP16.97■□□□□ 0.31
SUMO1-208ENST00000409627 SIT1Q9Y3P8 196 aa16.97■□□□□ 0.31
SUMO1-208ENST00000409627 MYO18AQ92614 2054 aaKnown RBP16.97■□□□□ 0.31
SUMO1-208ENST00000409627 CKAP5Q14008 2032 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 ANTXRLA6NF34 631 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 J3KR12 359 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 PPP1R12AO14974 1030 aaPredicted RBP16.96■□□□□ 0.31
SUMO1-208ENST00000409627 MAFKO60675 156 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms