RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 GRIK5Q16478 980 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 CCNYL2Q5T2Q4 361 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 ZNF773Q6PK81 442 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 ATG14Q6ZNE5 492 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 DCP2Q8IU60 420 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 TMEM35BQ8NCS4 154 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 GLT1D1Q96MS3 346 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 ACO2Q99798 780 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 TRIM15Q9C019 465 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 SP140LQ9H930 580 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 MARCH7Q9H992 704 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 AKIP1Q9NQ31 210 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 GPRC5CQ9NQ84 441 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 ZNF219Q9P2Y4 722 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 TMA7Q9Y2S6 64 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 RAP2CQ9Y3L5 183 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 TESPA1A2RU30 521 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 STX16-NPEPL1H3BU86 382 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 H7C0C1 242 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 ALDH1A2O94788 518 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 KRT6AP02538 564 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 KRT6BP04259 564 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 GNAO1P09471 354 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 CKMT2P17540 419 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 MATN1P21941 496 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 QARSP47897 775 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 ATP5OP48047 213 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 RPL14P50914 215 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 PRKAA2P54646 552 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 TUBA1BP68363 451 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 IFITM2Q01629 132 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 TRIM32Q13049 653 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 STX5Q13190 355 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 TFDP2Q14188 446 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 SNX17Q15036 470 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 SMTNL2Q2TAL5 461 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 PPP6R3Q5H9R7 873 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 ATAD3BQ5T9A4 648 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 TRMT10BQ6PF06 316 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 USP43Q70EL4 1123 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 TUBA1AQ71U36 451 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 ZFPM1Q8IX07 1006 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 CBR4Q8N4T8 237 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 MAPK15Q8TD08 544 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 SDCBP2Q9H190 292 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 SPAG4Q9NPE6 437 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 ANGPTL3Q9Y5C1 460 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 ST14Q9Y5Y6 855 aa5.94□□□□□ -1.46
R3HDM1-202ENST00000409478 ROBO1Q9Y6N7 1651 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 GAKO14976 1311 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 VWA5AO00534 786 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 TRIM24O15164 1050 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 PHGDHO43175 533 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 TRIM13O60858 407 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 GUCY1B2O75343 617 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 APRTP07741 180 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 HMGB2P26583 209 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 CAPGP40121 348 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 RAD23AP54725 363 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 BROXQ5VW32 411 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 SLFN13Q68D06 897 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 FAAH2Q6GMR7 532 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 PRR23CQ6ZRP0 262 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 BPHLQ86WA6 291 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 SUN5Q8TC36 379 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 CYGBQ8WWM9 190 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 LPGAT1Q92604 370 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 ELMO3Q96BJ8 720 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 GPR101Q96P66 508 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 SH2D3AQ9BRG2 576 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 TMEM216Q9P0N5 145 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 SARDHQ9UL12 918 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 PCDHGA7Q9Y5G6 932 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 RNF103-CHMP3A0A140T963 221 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 LRCH4O75427 683 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 CAPN15O75808 1086 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 HLA-DRAP01903 254 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 PRKCGP05129 697 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 TPSB2P20231 275 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 GARTP22102 1010 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 MZF1P28698 734 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 TYK2P29597 1187 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 HOXA13P31271 388 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 RFC1P35251 1148 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 GRIA3P42263 894 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 SERPINB10P48595 397 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 CHRNEQ04844 493 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 NIPAL4Q0D2K0 466 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 PDK2Q15119 407 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 TPSAB1Q15661 275 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 SAMD4BQ5PRF9 694 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 BTBD8Q5XKL5 378 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 ZNF772Q68DY9 489 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 IQSEC1Q6DN90 963 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 SIGIRRQ6IA17 410 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 UGT3A1Q6NUS8 523 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 B3GNT9Q6UX72 402 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 TAS2R42Q7RTR8 314 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 TFAP2DQ7Z6R9 452 aa5.93□□□□□ -1.46
R3HDM1-202ENST00000409478 DHFR2Q86XF0 187 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms