RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 C1orf220Q5T0J3 134 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 C9orf64Q5T6V5 341 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 LCLAT1Q6UWP7 414 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 CHSY1Q86X52 802 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 HSCBQ8IWL3 235 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 SPACA3Q8IXA5 215 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 STK40Q8N2I9 435 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 ZNF843Q8N446 348 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 DCBLD1Q8N8Z6 715 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 EPS8L1Q8TE68 723 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 KCNE4Q8WWG9 221 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 RFFLQ8WZ73 363 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 NDRG1Q92597 394 aaKnown RBP7.99□□□□□ -1.13
LSM5-202ENST00000409292 GRAMD1AQ96CP6 724 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 SPATA32Q96LK8 384 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 NT5C1BQ96P26 610 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 DUSP23Q9BVJ7 150 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 DPH1Q9BZG8 443 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 ST7Q9NRC1 585 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 MAPK8IP1Q9UQF2 711 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 PCDHB4Q9Y5E5 795 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 ITIH6Q6UXX5 1313 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 IGSF10Q6WRI0 2623 aa7.99□□□□□ -1.13
LSM5-202ENST00000409292 ZZEF1O43149 2961 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 GOLGA6L7A0A1B0GV03 622 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 A0A1B0GVL5 298 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 TTC34A8MYJ7 566 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 M0QYV0 167 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 CBX4O00257 560 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 O00370 1275 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 ALOX15BO15296 676 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 SLC16A3O15427 465 aaKnown RBP7.98□□□□□ -1.13
LSM5-202ENST00000409292 KLK10O43240 276 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 LATO43561 262 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 IGLV3-27P01718 113 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 WNT1P04628 370 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 PFKFB1P16118 471 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 MZF1P28698 734 aaPredicted RBP7.98□□□□□ -1.13
LSM5-202ENST00000409292 MAT2AP31153 395 aaKnown RBP7.98□□□□□ -1.13
LSM5-202ENST00000409292 RECQLP46063 649 aaPredicted RBP7.98□□□□□ -1.13
LSM5-202ENST00000409292 RGS7P49802 495 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 SNX16P57768 344 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 ERVPABLB-1P60509 514 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 RPS24P62847 133 aaKnown RBP7.98□□□□□ -1.13
LSM5-202ENST00000409292 GABREP78334 506 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 KRT85P78386 507 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 FKBP3Q00688 224 aaKnown RBP7.98□□□□□ -1.13
LSM5-202ENST00000409292 BNIP3Q12983 259 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 CBLBQ13191 982 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 STIM1Q13586 685 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 CNGA2Q16280 664 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 FAM133BQ5BKY9 247 aaKnown RBP7.98□□□□□ -1.13
LSM5-202ENST00000409292 SFMBT2Q5VUG0 894 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 NEK5Q6P3R8 708 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 TMEM270Q6UE05 265 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 TRIM69Q86WT6 500 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 DCP2Q8IU60 420 aaKnown RBP7.98□□□□□ -1.13
LSM5-202ENST00000409292 LGI2Q8N0V4 545 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 CFAP52Q8N1V2 620 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 TPCN2Q8NHX9 752 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 ERCC4Q92889 916 aaPredicted RBP7.98□□□□□ -1.13
LSM5-202ENST00000409292 GLMNQ92990 594 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 P2RY11Q96G91 374 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 NAF1Q96HR8 494 aaKnown RBP7.98□□□□□ -1.13
LSM5-202ENST00000409292 BTN2A3PQ96KV6 586 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 MED15Q96RN5 788 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 ORAI3Q9BRQ5 295 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 MIS12Q9H081 205 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 MTG2Q9H4K7 406 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 METTL14Q9HCE5 456 aaKnown RBP7.98□□□□□ -1.13
LSM5-202ENST00000409292 PREBQ9HCU5 417 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 KLHL11Q9NVR0 708 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.98□□□□□ -1.13
LSM5-202ENST00000409292 SERGEFQ9UGK8 458 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 ARMCX3Q9UH62 379 aaPredicted RBP7.98□□□□□ -1.13
LSM5-202ENST00000409292 IPO11Q9UI26 975 aaKnown RBP7.98□□□□□ -1.13
LSM5-202ENST00000409292 CYTH4Q9UIA0 394 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 HOOK1Q9UJC3 728 aaKnown RBP7.98□□□□□ -1.13
LSM5-202ENST00000409292 RCOR1Q9UKL0 485 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 ATP6V1DQ9Y5K8 247 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 HEMK1Q9Y5R4 338 aaPredicted RBP7.98□□□□□ -1.13
LSM5-202ENST00000409292 TMEM131Q92545 1883 aa7.98□□□□□ -1.13
LSM5-202ENST00000409292 PTPRQQ9UMZ3 2332 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 DMXL2Q8TDJ6 3036 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 A0A1B0GVM2 712 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 TCAF2A6NFQ2 919 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 TULP2O00295 520 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 MED7O43513 233 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 SIGLEC6O43699 453 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 SDC3O75056 442 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 USP12O75317 370 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 GP1BAP07359 652 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 THEGLP0DJG4 465 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 TACR2P21452 398 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 SLC6A4P31645 630 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 LSSP48449 732 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 HNRNPKP61978 463 aaKnown RBP eCLIP7.97□□□□□ -1.13
LSM5-202ENST00000409292 KRT83P78385 493 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 CDK17Q00537 523 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 VAC14Q08AM6 782 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms