RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 ELOVL2Q9NXB9 296 aa34.03■■■■□ 3.04
CSNK1E-204ENST00000403904 HPCAL4Q9UM19 191 aa34.03■■■■□ 3.04
CSNK1E-204ENST00000403904 NDRG2Q9UN36 371 aaKnown RBP34.03■■■■□ 3.04
CSNK1E-204ENST00000403904 ANTXRLA6NF34 631 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 PGRMC1O00264 195 aaKnown RBP34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 KDELR3O43731 214 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 EGFP01133 1207 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 GARSP41250 739 aaKnown RBP34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 CTSOP43234 321 aaPredicted RBP34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 CREG2Q8IUH2 290 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 ATPAF2Q8N5M1 289 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 TTC17Q96AE7 1141 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 SHDQ96IW2 340 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 RAD54BQ9Y620 910 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 ATG2BQ96BY7 2078 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 J3KR12 359 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 K7EQS6 105 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 MX2P20592 715 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 DRD1P21728 446 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 STARD6P59095 220 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 B4GALNT4Q76KP1 1039 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 BZW1Q7L1Q6 419 aaKnown RBP34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 ZC3H18Q86VM9 953 aaKnown RBP34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 CYB5D2Q8WUJ1 264 aa34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 IPO11Q9UI26 975 aaKnown RBP34.02■■■■□ 3.04
CSNK1E-204ENST00000403904 ZMPSTE24O75844 475 aa34.01■■■■□ 3.03
CSNK1E-204ENST00000403904 PDK1Q15118 436 aa34.01■■■■□ 3.03
CSNK1E-204ENST00000403904 NOMO1Q15155 1222 aa34.01■■■■□ 3.03
CSNK1E-204ENST00000403904 SIX1Q15475 284 aaPredicted RBP34.01■■■■□ 3.03
CSNK1E-204ENST00000403904 LINGO4Q6UY18 593 aa34.01■■■■□ 3.03
CSNK1E-204ENST00000403904 LEKR1Q6ZMV7 388 aa34.01■■■■□ 3.03
CSNK1E-204ENST00000403904 TTC13Q8NBP0 860 aa34.01■■■■□ 3.03
CSNK1E-204ENST00000403904 CCNYQ8ND76 341 aa34.01■■■■□ 3.03
CSNK1E-204ENST00000403904 KIF18AQ8NI77 898 aa34.01■■■■□ 3.03
CSNK1E-204ENST00000403904 ACDQ96AP0 544 aa34.01■■■■□ 3.03
CSNK1E-204ENST00000403904 LGMNQ99538 433 aa34.01■■■■□ 3.03
CSNK1E-204ENST00000403904 NCAM2O15394 837 aa34■■■■□ 3.03
CSNK1E-204ENST00000403904 DCXO43602 365 aa34■■■■□ 3.03
CSNK1E-204ENST00000403904 MAFKO60675 156 aa34■■■■□ 3.03
CSNK1E-204ENST00000403904 ARF5P84085 180 aa34■■■■□ 3.03
CSNK1E-204ENST00000403904 ECT2LQ008S8 904 aa34■■■■□ 3.03
CSNK1E-204ENST00000403904 EIF4HQ15056 248 aaKnown RBP34■■■■□ 3.03
CSNK1E-204ENST00000403904 EDAQ92838 391 aa34■■■■□ 3.03
CSNK1E-204ENST00000403904 RPL10LQ96L21 214 aaKnown RBP34■■■■□ 3.03
CSNK1E-204ENST00000403904 ACTL7AQ9Y615 435 aa34■■■■□ 3.03
CSNK1E-204ENST00000403904 MYO18AQ92614 2054 aaKnown RBP34■■■■□ 3.03
CSNK1E-204ENST00000403904 URI1O94763 535 aaPredicted RBP33.99■■■■□ 3.03
CSNK1E-204ENST00000403904 ATP5BP06576 529 aaKnown RBP33.99■■■■□ 3.03
CSNK1E-204ENST00000403904 TNFRSF4P43489 277 aa33.99■■■■□ 3.03
CSNK1E-204ENST00000403904 SULT2A1Q06520 285 aa33.99■■■■□ 3.03
CSNK1E-204ENST00000403904 EMC10Q5UCC4 262 aa33.99■■■■□ 3.03
CSNK1E-204ENST00000403904 MAIP1Q8WWC4 291 aa33.99■■■■□ 3.03
CSNK1E-204ENST00000403904 ATG4AQ8WYN0 398 aa33.99■■■■□ 3.03
CSNK1E-204ENST00000403904 TTC28Q96AY4 2481 aa33.99■■■■□ 3.03
CSNK1E-204ENST00000403904 NAP1L3Q99457 506 aaPredicted RBP33.99■■■■□ 3.03
CSNK1E-204ENST00000403904 SP110Q9HB58 689 aa33.99■■■■□ 3.03
CSNK1E-204ENST00000403904 TIMM44O43615 452 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 SEC13P55735 322 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 LRRC49Q8IUZ0 686 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 C1orf54Q8WWF1 131 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 HDAC11Q96DB2 347 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 AP1M1Q9BXS5 423 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 ZDHHC4Q9NPG8 344 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 HCN2Q9UL51 889 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 KANSL1LA0AUZ9 987 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 PPP1R12AO14974 1030 aaPredicted RBP33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 PRAMEF11O60813 436 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 MT-CO1P00395 513 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 DLDP09622 509 aaKnown RBP33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 STK19P49842 368 aaPredicted RBP33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 EIF3EP60228 445 aaKnown RBP33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 SIGLEC14Q08ET2 396 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 CCINQ13939 588 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 FOXQ1Q9C009 403 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 ERVW-1Q9UQF0 538 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 MRPS17Q9Y2R5 130 aaKnown RBP33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 STARD13Q9Y3M8 1113 aa33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 MTF2Q9Y483 593 aaPredicted RBP33.98■■■■□ 3.03
CSNK1E-204ENST00000403904 IL10RBQ08334 325 aa33.97■■■■□ 3.03
CSNK1E-204ENST00000403904 AP1B1Q10567 949 aa33.97■■■■□ 3.03
CSNK1E-204ENST00000403904 UBXN2BQ14CS0 331 aa33.97■■■■□ 3.03
CSNK1E-204ENST00000403904 PTPRNQ16849 979 aa33.97■■■■□ 3.03
CSNK1E-204ENST00000403904 RETSATQ6NUM9 610 aa33.97■■■■□ 3.03
CSNK1E-204ENST00000403904 UCMAQ8WVF2 138 aa33.97■■■■□ 3.03
CSNK1E-204ENST00000403904 TSGA13Q96PP4 275 aa33.97■■■■□ 3.03
CSNK1E-204ENST00000403904 TBC1D17Q9HA65 648 aa33.97■■■■□ 3.03
CSNK1E-204ENST00000403904 PDFQ9HBH1 243 aa33.97■■■■□ 3.03
CSNK1E-204ENST00000403904 LTB4R2Q9NPC1 389 aa33.97■■■■□ 3.03
CSNK1E-204ENST00000403904 RBM12Q9NTZ6 932 aaKnown RBP33.97■■■■□ 3.03
CSNK1E-204ENST00000403904 SLC25A13Q9UJS0 675 aa33.97■■■■□ 3.03
CSNK1E-204ENST00000403904 H7C0C1 242 aa33.96■■■■□ 3.03
CSNK1E-204ENST00000403904 MCF2LO15068 1137 aa33.96■■■■□ 3.03
CSNK1E-204ENST00000403904 ASLP04424 464 aa33.96■■■■□ 3.03
CSNK1E-204ENST00000403904 TARSP26639 723 aaKnown RBP33.96■■■■□ 3.03
CSNK1E-204ENST00000403904 ATP5OP48047 213 aa33.96■■■■□ 3.03
CSNK1E-204ENST00000403904 PPIDQ08752 370 aaKnown RBP33.96■■■■□ 3.03
CSNK1E-204ENST00000403904 ZNF687Q8N1G0 1237 aa33.96■■■■□ 3.03
CSNK1E-204ENST00000403904 C10orf88Q9H8K7 445 aa33.96■■■■□ 3.03
CSNK1E-204ENST00000403904 PLA2G4CQ9UP65 541 aa33.96■■■■□ 3.03
CSNK1E-204ENST00000403904 PDE2AO00408 941 aaPredicted RBP33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms