RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 TSPAN1O60635 241 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 ZMPSTE24O75844 475 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 BCAT1P54687 386 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 FOLH1Q04609 750 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 PDCD2Q16342 344 aaPredicted RBP20.22■□□□□ 0.83
CCDC47-202ENST00000403162 MARCH8Q5T0T0 291 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 NAPRTQ6XQN6 538 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 CLEC14AQ86T13 490 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 RNF180Q86T96 592 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 SREK1Q8WXA9 508 aaKnown RBP20.22■□□□□ 0.83
CCDC47-202ENST00000403162 DTNBP1Q96EV8 351 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 PPP1R16BQ96T49 567 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 OXCT2Q9BYC2 517 aaPredicted RBP20.22■□□□□ 0.83
CCDC47-202ENST00000403162 STK39Q9UEW8 545 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 AKT3Q9Y243 479 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 DTNAQ9Y4J8 743 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 NRCAMQ92823 1304 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 KPNA7A9QM74 516 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 E9PBE3 544 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 KLHL41O60662 606 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 MPOP05164 745 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 ASGR1P07306 291 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 GMPRP36959 345 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 GRM5P41594 1212 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 PDK1Q15118 436 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 SLC5A9Q2M3M2 681 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 FBXL19Q6PCT2 694 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 TNS4Q8IZW8 715 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 PLD6Q8N2A8 252 aaKnown RBP20.22■□□□□ 0.83
CCDC47-202ENST00000403162 PQLC1Q8N2U9 271 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 EFCAB3Q8N7B9 438 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 ANKRD52Q8NB46 1076 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 CNDP1Q96KN2 507 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 FCRL3Q96P31 734 aaPredicted RBP20.22■□□□□ 0.83
CCDC47-202ENST00000403162 LRRC40Q9H9A6 602 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 INPP5FQ9Y2H2 1132 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 DERAQ9Y315 318 aa20.22■□□□□ 0.83
CCDC47-202ENST00000403162 DENRO43583 198 aaKnown RBP20.21■□□□□ 0.83
CCDC47-202ENST00000403162 CST5P28325 142 aaPredicted RBP20.21■□□□□ 0.83
CCDC47-202ENST00000403162 ACADSBP45954 432 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 ALDH1A3P47895 512 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 GRAMD1BQ3KR37 738 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 LHX8Q68G74 356 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 CES3Q6UWW8 571 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 TMEM126BQ8IUX1 230 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 ZNF567Q8N184 647 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 MARVELD2Q8N4S9 558 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 C7orf31Q8N865 590 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 MAPK15Q8TD08 544 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.21■□□□□ 0.83
CCDC47-202ENST00000403162 UNC93B1Q9H1C4 597 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 TCF7L2Q9NQB0 619 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 MAN1C1Q9NR34 630 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 PPEF2O14830 753 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 THRAP10827 490 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 LCP1P13796 627 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 TDRD5Q8NAT2 981 aaKnown RBP20.21■□□□□ 0.83
CCDC47-202ENST00000403162 PCSK9Q8NBP7 692 aaKnown RBP20.21■□□□□ 0.83
CCDC47-202ENST00000403162 LENG8Q96PV6 779 aaPredicted RBP20.21■□□□□ 0.83
CCDC47-202ENST00000403162 SERPINI1Q99574 410 aa20.21■□□□□ 0.83
CCDC47-202ENST00000403162 C15orf38-AP3S2A0A0A6YYH1 394 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 TRIM13O60858 407 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 FBXO21O94952 628 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 VTNP04004 478 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 MATKP42679 507 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 IFRD2Q12894 506 aaPredicted RBP20.2■□□□□ 0.82
CCDC47-202ENST00000403162 CCSAPQ6IQ19 270 aaPredicted RBP20.2■□□□□ 0.82
CCDC47-202ENST00000403162 FSTL4Q6MZW2 842 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 C16orf89Q6UX73 402 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 TMC7Q7Z402 723 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 ARPINQ7Z6K5 226 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 STRA8Q7Z7C7 330 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 FAM131BQ86XD5 332 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 LRRC52Q8N7C0 313 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.2■□□□□ 0.82
CCDC47-202ENST00000403162 OR6B3Q8NGW1 331 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 SLC7A14Q8TBB6 771 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 RNF139Q8WU17 664 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 LPIN3Q9BQK8 851 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 CEP41Q9BYV8 373 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 DPEP3Q9H4B8 488 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 PLEKHA5Q9HAU0 1116 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 VPS28Q9UK41 221 aa20.2■□□□□ 0.82
CCDC47-202ENST00000403162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.19■□□□□ 0.82
CCDC47-202ENST00000403162 E2F8A0AVK6 867 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 TXNDC9O14530 226 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 CLCN2P51788 898 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 LBX1P52954 281 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 SMAD1Q15797 465 aaKnown RBP20.19■□□□□ 0.82
CCDC47-202ENST00000403162 SLC25A52Q3SY17 297 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 TMEM135Q86UB9 458 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 DCUN1D1Q96GG9 259 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 OR52B2Q96RD2 323 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 NDNQ99608 321 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 SEPT10Q9P0V9 454 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 ZNF638Q14966 1978 aaKnown RBP20.19■□□□□ 0.82
CCDC47-202ENST00000403162 A0A096LPK6 155 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 C17orf102A2RUQ5 167 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 SLC22A2O15244 555 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 ZNF189O75820 626 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms