RNA–Protein interactions for RNA: ENST00000400017.6

RPGRIP1-202, Transcript of RPGR interacting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RPGRIP1, Length 3,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-202ENST00000400017 HDAC3O15379 428 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 CCNT2O60583 730 aaKnown RBP13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 SLC25A27O95847 323 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 MLNP12872 115 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 ARRB2P32121 409 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 IREB2P48200 963 aaKnown RBP13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 NME5P56597 212 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 TMED1Q13445 227 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 LAMC2Q13753 1193 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 PTK2BQ14289 1009 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 GRIK4Q16099 956 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 ARL13BQ3SXY8 428 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 FAM91A1Q658Y4 838 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 TWF2Q6IBS0 349 aaKnown RBP13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 KHSRPQ92945 711 aaKnown RBP eCLIP13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 EFCAB1Q9HAE3 211 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 MKS1Q9NXB0 559 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 LZTS1Q9Y250 596 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 EVPLQ92817 2033 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 RGSL1A5PLK6 1076 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 TPST1O60507 370 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 HNRNPLP14866 589 aaKnown RBP eCLIP13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 ARL1P40616 181 aaPredicted RBP13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 GRM3Q14832 879 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 NAT14Q8WUY8 206 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 MRPL1Q9BYD6 325 aaKnown RBP13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 CAAP1Q9H8G2 361 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 SNX13Q9Y5W8 968 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 TMEM233B4DJY2 109 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 TFEBP19484 476 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 PDAP1Q13442 181 aaKnown RBP13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 ITPRIPL1Q6GPH6 555 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 LRRC8EQ6NSJ5 796 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 ARNTL2Q8WYA1 636 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 ZNF560Q96MR9 790 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 FSD1LQ9BXM9 530 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 MTMR10Q9NXD2 777 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 CCDC167Q9P0B6 97 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 XPR1Q9UBH6 696 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 DNAJB4Q9UDY4 337 aa13.73□□□□□ -0.21
RPGRIP1-202ENST00000400017 SEC24DO94855 1032 aaPredicted RBP13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 MOCS2O96007 188 aaPredicted RBP13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 ME2P23368 584 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 EDNRBP24530 442 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 TAF6P49848 677 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 LIMK2P53671 638 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 NIPAL4Q0D2K0 466 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 SLC25A52Q3SY17 297 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 RTKNQ9BST9 563 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 ULBP1Q9BZM6 244 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 UBQLN1Q9UMX0 589 aaKnown RBP13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 PSMD13Q9UNM6 376 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 ASB14A6NK59 587 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 BUD23O43709 281 aaKnown RBP13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 TSPAN8P19075 237 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 NMBRP28336 390 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 NOTUMQ6P988 496 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 HFE2Q6ZVN8 426 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 ACVR1CQ8NER5 493 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 PHF21BQ96EK2 531 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 ACOT9Q9Y305 439 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 XPOTO43592 962 aaKnown RBP13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 MPOP05164 745 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 USP17L7P0C7H9 530 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 CD1EP15812 388 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 RPS6KA3P51812 740 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 CSHL1Q14406 222 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 INSCQ1MX18 579 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 C9orf57Q5W0N0 161 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 OTOP3Q7RTS5 596 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 FZD10Q9ULW2 581 aa13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 SF3B1O75533 1304 aaKnown RBP eCLIP13.72□□□□□ -0.21
RPGRIP1-202ENST00000400017 FAM72CH0Y354 149 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 GABBR2O75899 941 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 FAM72AQ5TYM5 149 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 FAM72DQ6L9T8 149 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 SLC27A1Q6PCB7 646 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 FAM72BQ86X60 149 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 RHBDL2Q9NX52 303 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 AURKCQ9UQB9 309 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 DDHD2O94830 711 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 PTPN3P26045 913 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 PRKAA1Q13131 559 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 MSLNQ13421 630 aaPredicted RBP13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 TUBB3Q13509 450 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 KIF19Q2TAC6 998 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 ANO4Q32M45 955 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 PAN2Q504Q3 1202 aaKnown RBP13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 STRADAQ7RTN6 431 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 B3GALNT2Q8NCR0 500 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 SPATA22Q8NHS9 363 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 RNF217Q8TC41 542 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 WNT8BQ93098 351 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 EPAS1Q99814 870 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 CCT7Q99832 543 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 WDCPQ9H6R7 721 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 PIGVQ9NUD9 493 aa13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 GNEQ9Y223 722 aaKnown RBP13.71□□□□□ -0.21
RPGRIP1-202ENST00000400017 COMMD3-BMI1R4GMX3 469 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms