RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ERGIC2Q96RQ1 377 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 TCF7L2Q9NQB0 619 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 IL17RBQ9NRM6 502 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 OR10H1Q9Y4A9 318 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 CAMSAP1Q5T5Y3 1602 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 OPLAHO14841 1288 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 MAGEA10P43363 369 aaPredicted RBP13.96□□□□□ -0.17
VAPA-202ENST00000400000 RPL21P46778 160 aaKnown RBP13.96□□□□□ -0.17
VAPA-202ENST00000400000 PKN2Q16513 984 aaKnown RBP13.96□□□□□ -0.17
VAPA-202ENST00000400000 NFE2Q16621 373 aaPredicted RBP13.96□□□□□ -0.17
VAPA-202ENST00000400000 FAM98BQ52LJ0 330 aaKnown RBP13.96□□□□□ -0.17
VAPA-202ENST00000400000 TRIQKQ629K1 86 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 DDHD1Q8NEL9 900 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 PIGKQ92643 395 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 TNKS2Q9H2K2 1166 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 TMBIM4Q9HC24 238 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 TRAV19A0A0A6YYK7 116 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 TRIM24O15164 1050 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 ATP9AO75110 1047 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 IFNA14P01570 189 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 MIPP30301 263 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 SCTRP47872 440 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 NDRG1Q92597 394 aaKnown RBP13.96□□□□□ -0.17
VAPA-202ENST00000400000 OPTCQ9UBM4 332 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 RABGEF1Q9UJ41 708 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 CLEC4AQ9UMR7 237 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 RNF17Q9BXT8 1623 aaKnown RBP13.96□□□□□ -0.17
VAPA-202ENST00000400000 SLITRK3O94933 977 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 MPOP05164 745 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 TSPAN19P0C672 248 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 SHMT1P34896 483 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 SNX30Q5VWJ9 437 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 C12orf29Q8N999 325 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 JSRP1Q96MG2 331 aaPredicted RBP13.96□□□□□ -0.17
VAPA-202ENST00000400000 DCLK3Q9C098 648 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 LACRTQ9GZZ8 138 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 OGDHLQ9ULD0 1010 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 EFR3BQ9Y2G0 817 aa13.96□□□□□ -0.17
VAPA-202ENST00000400000 PNMA8CA0A1B0GUJ8 204 aa13.96□□□□□ -0.18
VAPA-202ENST00000400000 NEDD8-MDP1E9PL57 170 aa13.96□□□□□ -0.18
VAPA-202ENST00000400000 FARP2O94887 1054 aaPredicted RBP13.96□□□□□ -0.18
VAPA-202ENST00000400000 VIL1P09327 827 aaKnown RBP13.96□□□□□ -0.18
VAPA-202ENST00000400000 RPL4P36578 427 aaKnown RBP13.96□□□□□ -0.18
VAPA-202ENST00000400000 TARBP2Q15633 366 aaKnown RBP13.96□□□□□ -0.18
VAPA-202ENST00000400000 KCTD21Q4G0X4 260 aa13.96□□□□□ -0.18
VAPA-202ENST00000400000 POLNQ7Z5Q5 900 aa13.96□□□□□ -0.18
VAPA-202ENST00000400000 CHPFQ8IZ52 775 aa13.96□□□□□ -0.18
VAPA-202ENST00000400000 SOCS4Q8WXH5 440 aa13.96□□□□□ -0.18
VAPA-202ENST00000400000 ING5Q8WYH8 240 aa13.96□□□□□ -0.18
VAPA-202ENST00000400000 DAPK2Q9UIK4 370 aa13.96□□□□□ -0.18
VAPA-202ENST00000400000 RAD54BQ9Y620 910 aa13.96□□□□□ -0.18
VAPA-202ENST00000400000 A0A1B0GW55 424 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 CXCL14O95715 111 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 DUX4L2P0CJ85 424 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 DUX4L3P0CJ86 424 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 DUX4L4P0CJ87 422 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 DUX4L5P0CJ88 424 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 DUX4L6P0CJ89 424 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 DUX4L7P0CJ90 424 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 SMIM10L2AP0DMW4 78 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 SMIM10L2BP0DMW5 78 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 IL2P60568 153 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 MYBPC1Q00872 1141 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 RHAGQ02094 409 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 CYB5D1Q6P9G0 228 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 DENND6AQ8IWF6 608 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 PROX1Q92786 737 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 DUX4Q9UBX2 424 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 SLC12A4Q9UP95 1085 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 DNALI1O14645 258 aaPredicted RBP13.95□□□□□ -0.18
VAPA-202ENST00000400000 PEX11AO75192 247 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 TCEA3O75764 348 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 FAM153BP0C7A2 387 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 RARGP13631 454 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 CDH17Q12864 832 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 FAM153CQ494X1 144 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 ARMC4Q5T2S8 1044 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 GRTP1Q5TC63 336 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 SLC22A9Q8IVM8 553 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 EQTNQ9NQ60 294 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 ARHGAP20Q9P2F6 1191 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 DPP7Q9UHL4 492 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 PCDHB9Q9Y5E1 797 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 HPCAL1P37235 193 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 RENBPP51606 427 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 TMEM132CQ8N3T6 1108 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 ALLCQ8N6M5 410 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 NSMCE2Q96MF7 247 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 ABHD16BQ9H3Z7 469 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 ZNF839A8K0R7 811 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 SCN2BO60939 215 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 ATP5BP06576 529 aaKnown RBP13.95□□□□□ -0.18
VAPA-202ENST00000400000 PTPRAP18433 802 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 RABGGTBP53611 331 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 IFI35P80217 286 aaPredicted RBP13.95□□□□□ -0.18
VAPA-202ENST00000400000 FAM183BPQ6ZVS7 135 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 FIBCD1Q8N539 461 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 GLIS3Q8NEA6 775 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 GDPD5Q8WTR4 605 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 KAT5Q92993 513 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms