RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 TMEM245Q9H330 911 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CD248Q9HCU0 757 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 THAP10Q9P2Z0 257 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 VPS28Q9UK41 221 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CHURC1-FNTBB4DL54 471 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SGK1O00141 431 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ZRANB2O95218 330 aaKnown RBP eCLIP12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 MT-CO1P00395 513 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 POLR2EP19388 210 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 COL9A1P20849 921 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PRKCHP24723 683 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 DNA2P51530 1060 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 NDST2P52849 883 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 RWDD2BP57060 319 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 YBEYP58557 167 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 MRPS21P82921 87 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SLC10A2Q12908 348 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SERINC3Q13530 473 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 POLD3Q15054 466 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PPP2R5EQ16537 467 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ZFYVE27Q5T4F4 411 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 TMCO3Q6UWJ1 677 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 NPNTQ6UXI9 565 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 LINGO4Q6UY18 593 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 MAP7D3Q8IWC1 876 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 CCDC117Q8IWD4 279 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 RCOR2Q8IZ40 523 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 CCDC33Q8N5R6 958 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ALLCQ8N6M5 410 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 RBM41Q96IZ5 413 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 RPL10LQ96L21 214 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ALS2CR12Q96Q35 445 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SPON2Q9BUD6 331 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PDFQ9HBH1 243 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ATP13A1Q9HD20 1204 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 CACNA2D2Q9NY47 1150 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SLCO3A1Q9UIG8 710 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ERVW-1Q9UQF0 538 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ZNF318Q5VUA4 2279 aa12.7□□□□□ -0.38
HLA-DQB1-203ENST00000399082 A0A1W2PQF6 199 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 K7ERQ8 282 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 DLL1O00548 723 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 TIMM44O43615 452 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 MAP3K6O95382 1288 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 KLF8O95600 359 aaPredicted RBP12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PEX11BO96011 259 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ASLP04424 464 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PTPN7P35236 360 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 WASP42768 502 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 VASPP50552 380 aaPredicted RBP12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PAPOLAP51003 745 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ECT2LQ008S8 904 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 GALNT2Q10471 571 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 MTAPQ13126 283 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PARP15Q460N3 678 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 TFDP3Q5H9I0 405 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ZNF569Q5MCW4 686 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 LEKR1Q6ZMV7 388 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 RFX6Q8HWS3 928 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 LZTR1Q8N653 840 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ZNF366Q8N895 744 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 TXNDC5Q8NBS9 432 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 FRS2Q8WU20 508 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 GABRG3Q99928 467 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 MTG2Q9H4K7 406 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 DTLQ9NZJ0 730 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 MMP17Q9ULZ9 603 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 STON1Q9Y6Q2 735 aa12.69□□□□□ -0.38
HLA-DQB1-203ENST00000399082 TCRBV7S2A1N4TA0A589 114 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 TTC34A8MYJ7 566 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PRR33A8MZF0 331 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 J3KR12 359 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 CBX4O00257 560 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ENC1O14682 589 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 NCAM2O15394 837 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SMAD6O43541 496 aaKnown RBP12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 KDELR3O43731 214 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 CST8O60676 142 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PRAMEF11O60813 436 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ZNF821O75541 412 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ATP1A1P05023 1023 aaKnown RBP12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 ATP5BP06576 529 aaKnown RBP12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SRCP12931 536 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 HLA-EP13747 358 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 VAV1P15498 845 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PECAM1P16284 738 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 AVPR2P30518 371 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 COPS2P61201 443 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 DYNLT1P63172 113 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 HS1BP3Q53T59 392 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 KAZNQ674X7 775 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 IL31Q6EBC2 164 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 KIAA1211LQ6NV74 962 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 TMEM92Q6UXU6 159 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 NUDT18Q6ZVK8 323 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 BBS12Q6ZW61 710 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 MAML2Q8IZL2 1156 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SPEM1Q8N4L4 309 aa12.68□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SH2D3CQ8N5H7 860 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms