RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 XYLBO75191 536 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 CCDC130P13994 396 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 PPIBP23284 216 aaKnown RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 PSMB9P28065 219 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 AMHR2Q16671 573 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 RFX4Q33E94 735 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 GPSM1Q86YR5 675 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ZDHHC13Q8IUH4 622 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 EPHX4Q8IUS5 362 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 WDR36Q8NI36 951 aaKnown RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 TATDN2Q93075 761 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 RNFT2Q96EX2 444 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 PTCD3Q96EY7 689 aaKnown RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 CCDC3Q9BQI4 270 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 CHORDC1Q9UHD1 332 aaPredicted RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 CDH9Q9ULB4 789 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ANGPT4Q9Y264 503 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 LACTBL1A8MY62 500 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 TPP1O14773 563 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 SEC22BO75396 215 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 CAPN15O75808 1086 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 UPP2O95045 317 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 SERPINA6P08185 405 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 TSPAN19P0C672 248 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ATXN8OSP0DMR3 200 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 PAICSP22234 425 aaKnown RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 MARSP56192 900 aaKnown RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ARMC12Q5T9G4 340 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 TTC23Q5W5X9 447 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 HDDC2Q7Z4H3 204 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 POP1Q99575 1024 aaKnown RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 MRPL57Q9BQC6 102 aaKnown RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 NFKBIZQ9BYH8 718 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 EPB41L4BQ9H329 900 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 CDHR5Q9HBB8 845 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 CCNB1IP1Q9NPC3 277 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 PLA2G4CQ9UP65 541 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 TNFSF13BQ9Y275 285 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ZBTB14O43829 449 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 NFICP08651 508 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 EPB42P16452 691 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 S100A3P33764 101 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 BCL2L1Q07817 233 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ITGB3BPQ13352 177 aaPredicted RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ANGPT1Q15389 498 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 SHROOM1Q2M3G4 852 aaPredicted RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 CBWD3Q5JTY5 395 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 GLRA4Q5JXX5 417 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 CBWD5Q5RIA9 395 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 BROXQ5VW32 411 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 BHLHB9Q6PI77 547 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 TMC7Q7Z402 723 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 PHACTR4Q8IZ21 702 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 B3GALNT2Q8NCR0 500 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 SKA1Q96BD8 255 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 HGH1Q9BTY7 390 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ADI1Q9BV57 179 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 SHCBP1LQ9BZQ2 653 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 PIGUQ9H490 435 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 REEP1Q9H902 201 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ZBTB12Q9Y330 459 aaPredicted RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 FER1L4A9Z1Z3 1794 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 CCDC189A1A4V9 331 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 CCNDBP1O95273 360 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ECDO95905 644 aaPredicted RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 IL12RB1P42701 662 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 GABRB2P47870 512 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 BMPR2Q13873 1038 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 GRM3Q14832 879 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ENKURQ8TC29 256 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 FNIP1Q8TF40 1166 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ATP13A1Q9HD20 1204 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ENTPD4Q9Y227 616 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 CBX4O00257 560 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 SLC9A3R1O14745 358 aaPredicted RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ATP5F1P24539 256 aaPredicted RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 SERPINA4P29622 427 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 OR1E1P30953 314 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 IL2P60568 153 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 MAMLD1Q13495 774 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 GJC2Q5T442 439 aaPredicted RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 KBTBD8Q8NFY9 601 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ACER1Q8TDN7 264 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 HDAC7Q8WUI4 952 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 WNT8BQ93098 351 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 RACGAP1Q9H0H5 632 aa8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 TRAFD1O14545 582 aaPredicted RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 HS6ST1O60243 411 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 TFRCP02786 760 aaKnown RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 AKR1A1P14550 325 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 TTPAP49638 278 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 PSEN2P49810 448 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 CASP7P55210 303 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 ATP6V0D1P61421 351 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 FAAP100Q0VG06 881 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 STARD3Q14849 445 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 PABPC1LQ4VXU2 614 aaKnown RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 ZNF470Q6ECI4 717 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 C16orf62Q7Z3J2 963 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 C12orf56Q8IXR9 622 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms