RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 UGCGQ16739 394 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 TRAF7Q6Q0C0 670 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 GATAD2AQ86YP4 633 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 CHPFQ8IZ52 775 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 BRD9Q9H8M2 597 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 A0A0A6YYK5 440 aaPredicted RBP14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 NCAM2O15394 837 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 RPN2P04844 631 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 PFKPQ01813 784 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 GRB14Q14449 540 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 KCNMB4Q86W47 210 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 SLC26A11Q86WA9 606 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 C3orf20Q8ND61 904 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 ACTL9Q8TC94 416 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 SEPHS2Q99611 448 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 DPY30Q9C005 99 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 NCKIPSDQ9NZQ3 722 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 Q9Y3F1 56 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 CCL16O15467 120 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 TYW3Q6IPR3 259 aaKnown RBP14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 CNKSR3Q6P9H4 555 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 RIPOR1Q6ZS17 1223 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 CCDC103Q8IW40 242 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 DPP10Q8N608 796 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 SPATA20Q8TB22 786 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 UTP15Q8TED0 518 aaKnown RBP14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 CXorf40BQ96DE9 158 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 TMEM51Q9NW97 253 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 DNMT3LQ9UJW3 386 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 MKL2Q9ULH7 1088 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 SERPINA4P29622 427 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 RFC2P35250 354 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 CD151P48509 253 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 POLR2LP62875 67 aaKnown RBP14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 TUSC3Q13454 348 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 GPM6BQ13491 265 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 MTDHQ86UE4 582 aaKnown RBP14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 ZDHHC17Q8IUH5 632 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 USP6NLQ92738 828 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 TBL1YQ9BQ87 522 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 KCNK1O00180 336 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 RALGDSQ12967 914 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 KCTD19Q17RG1 926 aaPredicted RBP14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 C1orf186Q6ZWK4 172 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 MCOLN2Q8IZK6 566 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 ZNF784Q8NCA9 323 aaPredicted RBP14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 ZNF606Q8WXB4 792 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 DLGAP2Q9P1A6 1054 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 ATP6V1HQ9UI12 483 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 ZNF7P17097 686 aaPredicted RBP14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 FNDC5Q8NAU1 212 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 SPPL2AQ8TCT8 520 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 TUBGCP4Q9UGJ1 667 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 CHURC1-FNTBB4DL54 471 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 RAD51BO15315 384 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 SEC22BO75396 215 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 IFNA14P01570 189 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 C16orf72Q14CZ0 275 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 NPLOC4Q8TAT6 608 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 CLEC4DQ8WXI8 215 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 AHSPQ9NZD4 102 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 CRYL1Q9Y2S2 319 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 NHSL1Q5SYE7 1610 aa14.46□□□□□ -0.09
PCDHA11-201ENST00000398640 UMPSP11172 480 aa14.46□□□□□ -0.1
PCDHA11-201ENST00000398640 GPR1P46091 355 aa14.46□□□□□ -0.1
PCDHA11-201ENST00000398640 MGAT5Q09328 741 aa14.46□□□□□ -0.1
PCDHA11-201ENST00000398640 ITGA9Q13797 1035 aa14.46□□□□□ -0.1
PCDHA11-201ENST00000398640 N4BP2L1Q5TBK1 243 aaPredicted RBP14.46□□□□□ -0.1
PCDHA11-201ENST00000398640 ZNF470Q6ECI4 717 aa14.46□□□□□ -0.1
PCDHA11-201ENST00000398640 COL26A1Q96A83 441 aa14.46□□□□□ -0.1
PCDHA11-201ENST00000398640 OSBPL6Q9BZF3 934 aa14.46□□□□□ -0.1
PCDHA11-201ENST00000398640 TM6SF2Q9BZW4 377 aa14.46□□□□□ -0.1
PCDHA11-201ENST00000398640 MID1IP1Q9NPA3 183 aa14.46□□□□□ -0.1
PCDHA11-201ENST00000398640 ABCC13Q9NSE7 274 aa14.46□□□□□ -0.1
PCDHA11-201ENST00000398640 VAPBO95292 243 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 PPP2R1BP30154 601 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 SARSP49591 514 aaKnown RBP14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 CSNK2BP67870 215 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 SCUBE1Q8IWY4 988 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 C7orf43Q8WVR3 580 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 IL1RAPL1Q9NZN1 696 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 TISP43B9A030 160 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 C1QTNF3-AMACRE9PGA6 284 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 UBDO15205 165 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 GZMAP12544 262 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 OR1D2P34982 312 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 PEX5P50542 639 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 TRIM32Q13049 653 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 SLC22A9Q8IVM8 553 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 FBXO39Q8N4B4 442 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 OR10G6Q8NH81 332 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 HTR3CQ8WXA8 447 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 OXCT2Q9BYC2 517 aaPredicted RBP14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 ZNF112Q9UJU3 913 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 NDRG2Q9UN36 371 aaKnown RBP14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 GABRQQ9UN88 632 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 DNM1LO00429 736 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 BMP10O95393 424 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 PAEPP09466 180 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 RARGP13631 454 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms