RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 LSM12Q3MHD2 195 aaKnown RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 KLHL35Q6PF15 583 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 ZBTB8OSQ8IWT0 167 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 SAMD14Q8IZD0 417 aaPredicted RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 LRRC43Q8N309 656 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 SPATA13Q96N96 652 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 PHF12Q96QT6 1004 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 CPNE1Q99829 537 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 CCT7Q99832 543 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 SLC4A5Q9BY07 1137 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 MUC3BQ9H195 1237 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 ZNF385DQ9H6B1 395 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 WDR41Q9HAD4 459 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 PTPRHQ9HD43 1115 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 EIF2B3Q9NR50 452 aaKnown RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 SYBUQ9NX95 663 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 RNF11Q9Y3C5 154 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 H0YJX3 145 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 MATN2O00339 956 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 NOP56O00567 594 aaKnown RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 NEMP1O14524 444 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 ACOT8O14734 319 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 MAGEB3O15480 346 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 FOXD2O60548 495 aaPredicted RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 TRIM13O60858 407 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 IL18RAPO95256 599 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 AMHP03971 560 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 ITGB3P05106 788 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 CXCL8P10145 99 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 EPHA3P29320 983 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 PPARGP37231 505 aaPredicted RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 CLK1P49759 484 aaKnown RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 RGS7P49802 495 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 ATXN3P54252 364 aaPredicted RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 TXNL4AP83876 142 aaKnown RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 LAMTOR4Q0VGL1 99 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 HERC3Q15034 1050 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 CYTH1Q15438 398 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 DPYSL2Q16555 572 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 MGAT5BQ3V5L5 792 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 SH3D19Q5HYK7 790 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 IER5Q5VY09 327 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 EEF1DP3Q658K8 133 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 LCLAT1Q6UWP7 414 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 CCBE1Q6UXH8 406 aaPredicted RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 TMEM192Q8IY95 271 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 TRIML2Q8N7C3 387 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 RNF148Q8N7C7 305 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 COLGALT1Q8NBJ5 622 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 RNF149Q8NC42 400 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 FNDC8Q8TC99 324 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 HTR3CQ8WXA8 447 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 KHSRPQ92945 711 aaKnown RBP eCLIP8.42□□□□□ -1.062e-6■■■□□ 17.4
TCF4-203ENST00000398339 MAELQ96JY0 434 aaKnown RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 NAT9Q9BTE0 207 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 GATA5Q9BWX5 397 aaPredicted RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 ILKAPQ9H0C8 392 aaPredicted RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 DHX35Q9H5Z1 703 aaKnown RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 RPF1Q9H9Y2 349 aaKnown RBP8.42□□□□□ -1.06
TCF4-203ENST00000398339 DTLQ9NZJ0 730 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 TSPAN16Q9UKR8 245 aa8.42□□□□□ -1.06
TCF4-203ENST00000398339 C7orf72A4D263 438 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 IQCA1LA6NCM1 817 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 STX16-NPEPL1H3BU86 382 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 HDAC3O15379 428 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 LTFP02788 710 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 HNRNPCP07910 306 aaKnown RBP eCLIP8.41□□□□□ -1.06
TCF4-203ENST00000398339 VARSP26640 1264 aaKnown RBP8.41□□□□□ -1.06
TCF4-203ENST00000398339 CHRNA5P30532 468 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 ADSLP30566 484 aaPredicted RBP8.41□□□□□ -1.06
TCF4-203ENST00000398339 ICAM3P32942 547 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 CD97P48960 835 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 TUBA1BP68363 451 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 DPYSQ14117 519 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 RFTN1Q14699 578 aaPredicted RBP8.41□□□□□ -1.06
TCF4-203ENST00000398339 ATF7IP2Q5U623 682 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 BSPRYQ5W0U4 402 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 POTEHQ6S545 545 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 CES3Q6UWW8 571 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 TRIM67Q6ZTA4 783 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 TUBA1AQ71U36 451 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 CLEC14AQ86T13 490 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 CDR2LQ86X02 465 aaPredicted RBP8.41□□□□□ -1.06
TCF4-203ENST00000398339 TMIGD2Q96BF3 282 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 HSPBAP1Q96EW2 488 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 CERS2Q96G23 380 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 GJD4Q96KN9 370 aaPredicted RBP8.41□□□□□ -1.06
TCF4-203ENST00000398339 PPP1R36Q96LQ0 422 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 BIRC8Q96P09 236 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 RBBP8Q99708 897 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 MAGEB5Q9BZ81 275 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 EPS15L1Q9UBC2 864 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 RAP2CQ9Y3L5 183 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 MFHAS1Q9Y4C4 1052 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 A0A096LPK6 155 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 GRID2O43424 1007 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 PARNO95453 639 aaKnown RBP8.41□□□□□ -1.06
TCF4-203ENST00000398339 H6PDO95479 791 aa8.41□□□□□ -1.06
TCF4-203ENST00000398339 MPOP05164 745 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms