RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 COPEO14579 308 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 PQBP1O60828 265 aaKnown RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 SLC11A2P49281 568 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 CCDC153Q494R4 210 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 RWDD4Q6NW29 188 aaKnown RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 FBXO46Q6PJ61 603 aaPredicted RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 SYBUQ9NX95 663 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 ZBTB24O43167 697 aaPredicted RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 VIMP08670 466 aaKnown RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 COL6A2P12110 1019 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 HOXB8P17481 243 aaPredicted RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 NFKB1P19838 968 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 PSMA3P25788 255 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 MGAT1P26572 445 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 SPRP35270 261 aaPredicted RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 OXCT1P55809 520 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 BBS5Q8N3I7 341 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 PDCD7Q8N8D1 485 aaKnown RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 ADAM32Q8TC27 787 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 CERS2Q96G23 380 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 RNF208Q9H0X6 261 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 TMPRSS4Q9NRS4 437 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 LZTS1Q9Y250 596 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 PLLPQ9Y342 182 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 RWDD3Q9Y3V2 267 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 CCDC189A1A4V9 331 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 TCP11X1B4DZS4 312 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 DCTN3O75935 186 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 RPA3P35244 121 aaPredicted RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 ATP5C1P36542 298 aaKnown RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 SEC24CP53992 1094 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 VEPH1Q14D04 833 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 EFTUD2Q15029 972 aaKnown RBP eCLIP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 DDR2Q16832 855 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 TRIM60Q495X7 471 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 RTP2Q5QGT7 225 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 FAM91A1Q658Y4 838 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 PACS1Q6VY07 963 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 CTU1Q7Z7A3 348 aaKnown RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 SETD3Q86TU7 594 aaPredicted RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 CEP57Q86XR8 500 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 TCEAL8Q8IYN2 117 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 C7orf26Q96N11 449 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 SPG21Q9NZD8 308 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 TBK1Q9UHD2 729 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 CORO1CQ9ULV4 474 aaPredicted RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 F5H5T6 163 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 DFFAO00273 331 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 EPOP01588 193 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 CA4P22748 312 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 ETV4P43268 484 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 MAGEA9P43362 315 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 GJA8P48165 433 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 PAPOLAP51003 745 aaKnown RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 MGAT5BQ3V5L5 792 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 HECTD3Q5T447 861 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 PKN3Q6P5Z2 889 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 METTL3Q86U44 580 aaKnown RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 ZNF784Q8NCA9 323 aaPredicted RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 CALML6Q8TD86 181 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 IMP4Q96G21 291 aaKnown RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 RBBP8Q99708 897 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 IQCGQ9H095 443 aaKnown RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 TMEM39AQ9NV64 488 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 ZNF212Q9UDV6 495 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 IPO11Q9UI26 975 aaKnown RBP7.53□□□□□ -1.2
RGPD1-201ENST00000398193 GRID1Q9ULK0 1009 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 MAD1L1Q9Y6D9 718 aa7.53□□□□□ -1.2
RGPD1-201ENST00000398193 ACSL4O60488 711 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 EDF1O60869 148 aaKnown RBP7.52□□□□□ -1.21
RGPD1-201ENST00000398193 OR4Q2P0C623 313 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 TACR2P21452 398 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 DDX6P26196 483 aaKnown RBP eCLIP7.52□□□□□ -1.21
RGPD1-201ENST00000398193 CSRP3P50461 194 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 WDR4P57081 412 aaKnown RBP7.52□□□□□ -1.21
RGPD1-201ENST00000398193 USP46P62068 366 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 TAF10Q12962 218 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 C10orf120Q5SQS8 335 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 KIAA0408Q6ZU52 694 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 FAM217AQ8IXS0 508 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 OTUD6BQ8N6M0 293 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 ANKRD42Q8N9B4 389 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 ZNF461Q8TAF7 563 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 SREK1Q8WXA9 508 aaKnown RBP7.52□□□□□ -1.21
RGPD1-201ENST00000398193 PPM1EQ8WY54 764 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 TRPM5Q9NZQ8 1165 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 ZMYM5Q9UJ78 669 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 PLXNA4Q9HCM2 1894 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 CFAP73A6NFT4 308 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 F8W810 466 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 PRAMEF11O60813 436 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 RFPL1O75677 317 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 TROVE2P10155 538 aaKnown RBP eCLIP7.52□□□□□ -1.21
RGPD1-201ENST00000398193 ATF6P18850 670 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 ALDH3A1P30838 453 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 PBX3P40426 434 aa7.52□□□□□ -1.21
RGPD1-201ENST00000398193 HARS2P49590 506 aaKnown RBP7.52□□□□□ -1.21
RGPD1-201ENST00000398193 ACTN3Q08043 901 aaPredicted RBP7.52□□□□□ -1.21
RGPD1-201ENST00000398193 NSUN2Q08J23 767 aaKnown RBP eCLIP7.52□□□□□ -1.21
RGPD1-201ENST00000398193 PABPC1LQ4VXU2 614 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms