RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 EPS8L2Q9H6S3 715 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 JMJD4Q9H9V9 463 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 CD209Q9NNX6 404 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 CYP26B1Q9NR63 512 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 CASP8AP2Q9UKL3 1982 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 NUDT19A8MXV4 375 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 RRP8O43159 456 aaKnown RBP6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 GCNT3O95395 438 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 ASS1P00966 412 aaKnown RBP6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 FGGP02679 453 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 NR3C1P04150 777 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 HLA-DPA1P20036 260 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 PON1P27169 355 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 DHPSP49366 369 aaPredicted RBP6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 IST1P53990 364 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 DCAF7P61962 342 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 TAP2Q03519 686 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 ZMYND11Q15326 602 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 ANKRD20A3Q5VUR7 823 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 MOXD1Q6UVY6 613 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 RFX8Q6ZV50 586 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 RNF180Q86T96 592 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 ZC3H3Q8IXZ2 948 aaKnown RBP6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 LRRC57Q8N9N7 239 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 CNBD1Q8NA66 436 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 OR2W6PQ8NHA6 318 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 DNAJB8Q8NHS0 232 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 ADAMTS16Q8TE57 1224 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 HAS1Q92839 578 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 TANKQ92844 425 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 RFKQ969G6 155 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 MFSD3Q96ES6 412 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 ZNF570Q96NI8 536 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 TRIM31Q9BZY9 425 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 SLC39A10Q9ULF5 831 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 A0A088AWK7 358 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 G3V3G9 751 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 DOK2O60496 412 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 GMNNO75496 209 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 SLITRK5O94991 958 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 IL6P05231 212 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 ITGA2BP08514 1039 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 PAEPP09466 180 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 PF4V1P10720 104 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 GATMP50440 423 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 FAM76BQ5HYJ3 339 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 ALG1LQ6GMV1 187 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 CHADLQ6NUI6 762 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 OGFOD3Q6PK18 319 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 LHFPL2Q6ZUX7 228 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 TMC3Q7Z5M5 1100 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 ITIH5Q86UX2 942 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 SFR1Q86XK3 245 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 PM20D2Q8IYS1 436 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 RASGEF1CQ8N431 466 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 UBL4BQ8N7F7 174 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 GRIN3AQ8TCU5 1115 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 LRRC8CQ8TDW0 803 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 LPPQ93052 612 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 ZNF341Q9BYN7 854 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 ANO3Q9BYT9 981 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 DCLK3Q9C098 648 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 C1orf21Q9H246 121 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 PDLIM7Q9NR12 457 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 AASSQ9UDR5 926 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 GGT7Q9UJ14 662 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 TLK1Q9UKI8 766 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 PLIN4Q96Q06 1357 aa6.72□□□□□ -1.33
TM9SF4-202ENST00000398022 USP17L15C9J2P7 530 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 USP17L10C9JJH3 530 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 USP17L13C9JLJ4 530 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 USP17L11C9JVI0 530 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 USP17L18D6R9N7 530 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 USP17L22D6RA61 530 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 USP17L17D6RBQ6 530 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 USP17L19D6RCP7 530 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 USP17L20D6RJB6 530 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 FBP2O00757 339 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 RGS16O15492 202 aaPredicted RBP6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 FMO6PO60774 539 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 LAG3P18627 525 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 ADSLP30566 484 aaPredicted RBP6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 NUP62P37198 522 aaPredicted RBP6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 WNT5AP41221 380 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 CASP5P51878 434 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 RHAGQ02094 409 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 USP17L24Q0WX57 530 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 CALCOCO2Q13137 446 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 EFR3AQ14156 821 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 TRADDQ15628 312 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 CAMK1DQ8IU85 385 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 PHC2Q8IXK0 858 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 SGCZQ96LD1 299 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 TDRD1Q9BXT4 1180 aaKnown RBP6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 SP110Q9HB58 689 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 NUDT15Q9NV35 164 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 SLC12A6Q9UHW9 1150 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 SERPINB13Q9UIV8 391 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 PCDHA1Q9Y5I3 950 aa6.71□□□□□ -1.33
TM9SF4-202ENST00000398022 MYH4Q9Y623 1939 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms