RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 NAALADL1Q9UQQ1 740 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 PCDHGA8Q9Y5G5 932 aa15.4■□□□□ 0.06
SEC13-206ENST00000397102 A0A1W2PNU3 283 aaPredicted RBP15.39■□□□□ 0.05
SEC13-206ENST00000397102 A0A1W2PQU0 124 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 F5H5T6 163 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 K7ESM1 405 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 PFKFB1P16118 471 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 PRLRP16471 622 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 HNRNPA2B1P22626 353 aaKnown RBP15.39■□□□□ 0.05
SEC13-206ENST00000397102 AKT2P31751 481 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 NUMBP49757 651 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 OXCT1P55809 520 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 STILQ15468 1287 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 ACCSLQ4AC99 568 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 PIP5KL1Q5T9C9 394 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 TCERG1LQ5VWI1 586 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 BEND5Q7L4P6 421 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 PRR11Q96HE9 360 aaPredicted RBP15.39■□□□□ 0.05
SEC13-206ENST00000397102 BTN2A3PQ96KV6 586 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 SLC25A13Q9UJS0 675 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 ENTPD2Q9Y5L3 495 aa15.39■□□□□ 0.05
SEC13-206ENST00000397102 A0A1B0GVL5 298 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 TCAF2A6NFQ2 919 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 CDRT15L2A8MXV6 281 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 K7ELQ4 463 aaPredicted RBP15.38■□□□□ 0.05
SEC13-206ENST00000397102 RIOK3O14730 519 aaKnown RBP15.38■□□□□ 0.05
SEC13-206ENST00000397102 CETN3O15182 167 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 SART1O43290 800 aaKnown RBP15.38■□□□□ 0.05
SEC13-206ENST00000397102 PRR29P0C7W0 189 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 ZNF18P17022 549 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 TGM2P21980 687 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 HNRNPKP61978 463 aaKnown RBP eCLIP15.38■□□□□ 0.05
SEC13-206ENST00000397102 CCDC15Q0P6D6 951 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 DLG2Q15700 870 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 ZNF284Q2VY69 593 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 DCAF17Q5H9S7 520 aaPredicted RBP15.38■□□□□ 0.05
SEC13-206ENST00000397102 TTC39BQ5VTQ0 682 aaPredicted RBP15.38■□□□□ 0.05
SEC13-206ENST00000397102 ZCCHC8Q6NZY4 707 aaKnown RBP15.38■□□□□ 0.05
SEC13-206ENST00000397102 TMEM270Q6UE05 265 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 GCNT7Q6ZNI0 430 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 Q6ZVU0 165 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 ABI3BPQ7Z7G0 1075 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 HORMAD1Q86X24 394 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 SLC22A18ASQ8N1D0 253 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 FAM174AQ8TBP5 190 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 KLK6Q92876 244 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 FAM149B1Q96BN6 582 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 ATXN7L3BQ96GX2 97 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 PPP1R9BQ96SB3 815 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 ZSWIM1Q9BR11 485 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 FAM117AQ9C073 453 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 CAAP1Q9H8G2 361 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 FZD3Q9NPG1 666 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 IL17BQ9UHF5 180 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 CFAP45Q9UL16 551 aa15.38■□□□□ 0.05
SEC13-206ENST00000397102 HEMK1Q9Y5R4 338 aaPredicted RBP15.38■□□□□ 0.05
SEC13-206ENST00000397102 KIF26BQ2KJY2 2108 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 NEBLO76041 1014 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 F13A1P00488 732 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 ZSCAN22P10073 491 aaPredicted RBP15.37■□□□□ 0.05
SEC13-206ENST00000397102 KRT10P13645 584 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 MLLT3P42568 568 aaPredicted RBP15.37■□□□□ 0.05
SEC13-206ENST00000397102 SRSF1Q07955 248 aaKnown RBP eCLIP15.37■□□□□ 0.05
SEC13-206ENST00000397102 DPYDQ12882 1025 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 NFATC3Q12968 1075 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 ZC3H12AQ5D1E8 599 aaKnown RBP15.37■□□□□ 0.05
SEC13-206ENST00000397102 RABGAP1LQ5R372 815 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 SYPL2Q5VXT5 272 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 CXorf57Q6NSI4 855 aaKnown RBP15.37■□□□□ 0.05
SEC13-206ENST00000397102 CLEC14AQ86T13 490 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 CIR1Q86X95 450 aaPredicted RBP15.37■□□□□ 0.05
SEC13-206ENST00000397102 DCP2Q8IU60 420 aaKnown RBP15.37■□□□□ 0.05
SEC13-206ENST00000397102 ATP6V0D2Q8N8Y2 350 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 ALG14Q96F25 216 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 NOX5Q96PH1 765 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 PRMT1Q99873 361 aaKnown RBP15.37■□□□□ 0.05
SEC13-206ENST00000397102 TRIM62Q9BVG3 475 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 DNAJC28Q9NX36 388 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 NCKIPSDQ9NZQ3 722 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 RCOR1Q9UKL0 485 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 HPSEQ9Y251 543 aa15.37■□□□□ 0.05
SEC13-206ENST00000397102 PTPN13Q12923 2485 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.36■□□□□ 0.05
SEC13-206ENST00000397102 A6NNZ2 444 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 KCNU1A8MYU2 1149 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 TCEA3O75764 348 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 IGLV3-25P01717 112 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 CMA1P23946 247 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 BRD2P25440 801 aaKnown RBP15.36■□□□□ 0.05
SEC13-206ENST00000397102 RPL34P49207 117 aaKnown RBP15.36■□□□□ 0.05
SEC13-206ENST00000397102 CLDN2P57739 230 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 LRMPQ12912 555 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 CLN3Q13286 438 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 ZNF177Q13360 481 aaPredicted RBP15.36■□□□□ 0.05
SEC13-206ENST00000397102 CDKN3Q16667 212 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 ARL13BQ3SXY8 428 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 RBM44Q6ZP01 1051 aaKnown RBP15.36■□□□□ 0.05
SEC13-206ENST00000397102 ARL14Q8N4G2 192 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 SH2D3CQ8N5H7 860 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 ZNF548Q8NEK5 533 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms