RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 C9orf64Q5T6V5 341 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 GRAMD4Q6IC98 578 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 SYT13Q7L8C5 426 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 METTL3Q86U44 580 aaKnown RBP10.85□□□□□ -0.67
NUP98-205ENST00000397007 SLCO2A1Q92959 643 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 NACA2Q9H009 215 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 DHX35Q9H5Z1 703 aaKnown RBP10.85□□□□□ -0.67
NUP98-205ENST00000397007 LZTFL1Q9NQ48 299 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 ERVW-1Q9UQF0 538 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 VPS13AQ96RL7 3174 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 H3BRJ5 948 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 APOC4-APOC2K7ER74 178 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 SPINT1O43278 529 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 APOC2P02655 101 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 ASLP04424 464 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 SRCP12931 536 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 PRKCHP24723 683 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 SERPINH1P50454 418 aaKnown RBP10.85□□□□□ -0.67
NUP98-205ENST00000397007 GBE1Q04446 702 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 SIX5Q8N196 739 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 SLC35F6Q8N357 371 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 CASKIN2Q8WXE0 1202 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 RBM41Q96IZ5 413 aaKnown RBP10.85□□□□□ -0.67
NUP98-205ENST00000397007 QKIQ96PU8 341 aaKnown RBP eCLIP10.85□□□□□ -0.67
NUP98-205ENST00000397007 NELL2Q99435 816 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 MGME1Q9BQP7 344 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 ELOVL2Q9NXB9 296 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 AMACRQ9UHK6 382 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 GUCA1BQ9UMX6 200 aa10.85□□□□□ -0.67
NUP98-205ENST00000397007 PRR33A8MZF0 331 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 RASA4BC9J798 803 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 MUSKO15146 869 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 RASA4O43374 803 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 NOP2P46087 812 aaKnown RBP10.84□□□□□ -0.67
NUP98-205ENST00000397007 CDH6P55285 790 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 IL10RBQ08334 325 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 EGFLAMQ63HQ2 1017 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 CBARPQ8N350 705 aaPredicted RBP10.84□□□□□ -0.67
NUP98-205ENST00000397007 CSGALNACT1Q8TDX6 532 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 NKD2Q969F2 451 aaPredicted RBP10.84□□□□□ -0.67
NUP98-205ENST00000397007 ECHDC3Q96DC8 303 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 RPRD1AQ96P16 312 aaPredicted RBP10.84□□□□□ -0.67
NUP98-205ENST00000397007 XPO6Q96QU8 1125 aaKnown RBP10.84□□□□□ -0.67
NUP98-205ENST00000397007 FAM129BQ96TA1 746 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 AMFRQ9UKV5 643 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 SYNJ2BP-COX16A0A087WUM0 186 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 TRAFD1O14545 582 aaPredicted RBP10.84□□□□□ -0.67
NUP98-205ENST00000397007 LILRB5O75023 590 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 CCNCP24863 283 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 PSMA3P25788 255 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 RWDD2BP57060 319 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 WASHC5Q12768 1159 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 NR1H3Q13133 447 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 RFTN1Q14699 578 aaPredicted RBP10.84□□□□□ -0.67
NUP98-205ENST00000397007 ZNF528Q3MIS6 628 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 MFN1Q8IWA4 741 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 ATP13A1Q9HD20 1204 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 DNAJC17Q9NVM6 304 aaKnown RBP10.84□□□□□ -0.67
NUP98-205ENST00000397007 KLHL11Q9NVR0 708 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 PLK2Q9NYY3 685 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 COX16Q9P0S2 106 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 EBF1Q9UH73 591 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 CA14Q9ULX7 337 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 MMP17Q9ULZ9 603 aa10.84□□□□□ -0.67
NUP98-205ENST00000397007 ALOX15BO15296 676 aa10.83□□□□□ -0.67
NUP98-205ENST00000397007 TP73O15350 636 aa10.83□□□□□ -0.67
NUP98-205ENST00000397007 IL12RB1P42701 662 aa10.83□□□□□ -0.67
NUP98-205ENST00000397007 PAPOLAP51003 745 aaKnown RBP10.83□□□□□ -0.67
NUP98-205ENST00000397007 TPI1P60174 286 aa10.83□□□□□ -0.67
NUP98-205ENST00000397007 ZNF234Q14588 700 aa10.83□□□□□ -0.67
NUP98-205ENST00000397007 MBLAC2Q68D91 279 aa10.83□□□□□ -0.67
NUP98-205ENST00000397007 YAF2Q8IY57 180 aa10.83□□□□□ -0.67
NUP98-205ENST00000397007 HSPH1Q92598 858 aa10.83□□□□□ -0.67
NUP98-205ENST00000397007 FOXQ1Q9C009 403 aa10.83□□□□□ -0.67
NUP98-205ENST00000397007 PPIL1Q9Y3C6 166 aa10.83□□□□□ -0.67
NUP98-205ENST00000397007 BCLAF3A2AJT9 711 aaKnown RBP10.83□□□□□ -0.68
NUP98-205ENST00000397007 FZD6O60353 706 aa10.83□□□□□ -0.68
NUP98-205ENST00000397007 SLC20A2Q08357 652 aa10.83□□□□□ -0.68
NUP98-205ENST00000397007 NSUN2Q08J23 767 aaKnown RBP eCLIP10.83□□□□□ -0.68
NUP98-205ENST00000397007 PREPLQ4J6C6 727 aaPredicted RBP10.83□□□□□ -0.68
NUP98-205ENST00000397007 TMEM92Q6UXU6 159 aa10.83□□□□□ -0.68
NUP98-205ENST00000397007 C17orf53Q8N3J3 647 aaPredicted RBP10.83□□□□□ -0.68
NUP98-205ENST00000397007 DDI1Q8WTU0 396 aa10.83□□□□□ -0.68
NUP98-205ENST00000397007 SHDQ96IW2 340 aa10.83□□□□□ -0.68
NUP98-205ENST00000397007 FRMD8P1Q9BZ68 369 aaPredicted RBP10.83□□□□□ -0.68
NUP98-205ENST00000397007 RSPH9Q9H1X1 276 aaPredicted RBP10.83□□□□□ -0.68
NUP98-205ENST00000397007 USP36Q9P275 1121 aaKnown RBP10.83□□□□□ -0.68
NUP98-205ENST00000397007 R3HDM2Q9Y2K5 976 aaKnown RBP10.83□□□□□ -0.68
NUP98-205ENST00000397007 FRYLO94915 3013 aa10.83□□□□□ -0.68
NUP98-205ENST00000397007 ZNF500O60304 480 aaPredicted RBP10.83□□□□□ -0.68
NUP98-205ENST00000397007 CTSLP07711 333 aa10.83□□□□□ -0.68
NUP98-205ENST00000397007 DLDP09622 509 aaKnown RBP10.83□□□□□ -0.68
NUP98-205ENST00000397007 EPHB2P29323 1055 aa10.83□□□□□ -0.68
NUP98-205ENST00000397007 Q6ZS52 159 aa10.83□□□□□ -0.68
NUP98-205ENST00000397007 SLC13A5Q86YT5 568 aaPredicted RBP10.83□□□□□ -0.68
NUP98-205ENST00000397007 OR7D4Q8NG98 312 aa10.83□□□□□ -0.68
NUP98-205ENST00000397007 HCAR2Q8TDS4 363 aa10.83□□□□□ -0.68
NUP98-205ENST00000397007 ACOX2Q99424 681 aa10.83□□□□□ -0.68
NUP98-205ENST00000397007 BRD8Q9H0E9 1235 aa10.83□□□□□ -0.68
NUP98-205ENST00000397007 DEC1Q9P2X7 70 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms