RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 ZCCHC8Q6NZY4 707 aaKnown RBP8.68□□□□□ -1.02
SCFD1-202ENST00000396629 GCNT7Q6ZNI0 430 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 RBM44Q6ZP01 1051 aaKnown RBP8.68□□□□□ -1.02
SCFD1-202ENST00000396629 LGI2Q8N0V4 545 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 SLC22A18ASQ8N1D0 253 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 FBXL13Q8NEE6 735 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 DQX1Q8TE96 717 aaKnown RBP8.68□□□□□ -1.02
SCFD1-202ENST00000396629 SLC35F5Q8WV83 523 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 KLK6Q92876 244 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 ERCC4Q92889 916 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-202ENST00000396629 EEF2KMTQ96G04 330 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 SERPINB11Q96P15 392 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 NOX5Q96PH1 765 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 MYOCQ99972 504 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 CALN1Q9BXU9 219 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 NCKIPSDQ9NZQ3 722 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 SALL4Q9UJQ4 1053 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 KIAA1257Q9ULG3 409 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 TRPM6Q9BX84 2022 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 A0A1W2PQU0 124 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 EME2A4GXA9 379 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-202ENST00000396629 TNFSF15O95150 251 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 ITGB2P05107 769 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 HNRNPA2B1P22626 353 aaKnown RBP8.68□□□□□ -1.02
SCFD1-202ENST00000396629 NFKB2Q00653 900 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 RESP18Q5W5W9 173 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 PMF1Q6P1K2 205 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 GUSBP11Q6P575 273 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 LCLAT1Q6UWP7 414 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 EFL1Q7Z2Z2 1120 aaKnown RBP8.68□□□□□ -1.02
SCFD1-202ENST00000396629 HORMAD1Q86X24 394 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 UBR7Q8N806 425 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 CLEC4CQ8WTT0 213 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 ALG14Q96F25 216 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 ZNF396Q96N95 335 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-202ENST00000396629 FZD3Q9NPG1 666 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 FAM13BQ9NYF5 915 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.68□□□□□ -1.02
SCFD1-202ENST00000396629 SERTAD1Q9UHV2 236 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 XPO7Q9UIA9 1087 aaKnown RBP8.68□□□□□ -1.02
SCFD1-202ENST00000396629 HS3ST3A1Q9Y663 406 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 CCDC187A0A096LP49 1063 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-202ENST00000396629 ACTN4O43707 911 aaKnown RBP8.67□□□□□ -1.02
SCFD1-202ENST00000396629 NEBLO76041 1014 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 FBXO21O94952 628 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 GJB6O95452 261 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 NEFLP07196 543 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 ITGA2BP08514 1039 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 SFTPCP11686 197 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 CD19P15391 556 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 PDGFRAP16234 1089 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 TACR2P21452 398 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 RGS7P49802 495 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 MXI1P50539 228 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 INHBCP55103 352 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 CLDN2P57739 230 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 ZNF177Q13360 481 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-202ENST00000396629 CDKN3Q16667 212 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 ZNF542PQ5EBM4 170 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 RAP1GAP2Q684P5 730 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 Q6ZSR6 202 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 CEP57L1Q8IYX8 460 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 ZNF548Q8NEK5 533 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-202ENST00000396629 ARRDC3Q96B67 414 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 SGF29Q96ES7 293 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 PAGE5Q96GU1 130 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 BMFQ96LC9 184 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 DNAJC28Q9NX36 388 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 ZFR2Q9UPR6 939 aaKnown RBP8.67□□□□□ -1.02
SCFD1-202ENST00000396629 BSNQ9UPA5 3926 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 COL12A1Q99715 3063 aa8.67□□□□□ -1.02
SCFD1-202ENST00000396629 CPED1A4D0V7 1026 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 A6NNZ2 444 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 PIK3R2O00459 728 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 TPP1O14773 563 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 NOBOXO60393 691 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 MOCS2O96007 188 aaPredicted RBP8.66□□□□□ -1.02
SCFD1-202ENST00000396629 CSF2P04141 144 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 CENPBP07199 599 aaPredicted RBP8.66□□□□□ -1.02
SCFD1-202ENST00000396629 GP1BBP13224 206 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 NME1P15531 152 aaKnown RBP8.66□□□□□ -1.02
SCFD1-202ENST00000396629 ZNF18P17022 549 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 PDX1P52945 283 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 OXCT1P55809 520 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 YWHAEP62258 255 aaKnown RBP8.66□□□□□ -1.02
SCFD1-202ENST00000396629 CUL2Q13617 745 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 FZD2Q14332 565 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 DLG2Q15700 870 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 PERM1Q5SV97 790 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 CXorf57Q6NSI4 855 aaKnown RBP8.66□□□□□ -1.02
SCFD1-202ENST00000396629 FOXR1Q6PIV2 292 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 USP53Q70EK8 1073 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 CHSY1Q86X52 802 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 CCAR2Q8N163 923 aaKnown RBP8.66□□□□□ -1.02
SCFD1-202ENST00000396629 WDR48Q8TAF3 677 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 EXTL1Q92935 676 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 HSFY1Q96LI6 401 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 PRMT1Q99873 361 aaKnown RBP8.66□□□□□ -1.02
SCFD1-202ENST00000396629 SLC25A13Q9UJS0 675 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms