RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 RANBP2P49792 3224 aaKnown RBP16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 DCTN3O75935 186 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 ASPHQ12797 758 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 SPDYCQ5MJ68 293 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 ESRP1Q6NXG1 681 aaKnown RBP16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 RTN4RL1Q86UN2 441 aaPredicted RBP16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 ALYREFQ86V81 257 aaKnown RBP16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 SLC41A1Q8IVJ1 513 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 ATP6V0D2Q8N8Y2 350 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 GIMAP7Q8NHV1 300 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 FAM161BQ96MY7 647 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 RLFQ13129 1914 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 OR51F1A6NGY5 319 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 SPAG6O75602 509 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 FYNP06241 537 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 ITGA2BP08514 1039 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 LRRC36Q1X8D7 754 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 VWA5B1Q5TIE3 1220 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 CYB5D1Q6P9G0 228 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 RNF19BQ6ZMZ0 732 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 CYP4V2Q6ZWL3 525 aaPredicted RBP16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 TAS1R1Q7RTX1 841 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 LONP2Q86WA8 852 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 BBS5Q8N3I7 341 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 HDAC11Q96DB2 347 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 SEMA3CQ99985 751 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 FBXO44Q9H4M3 255 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 SF3B1O75533 1304 aaKnown RBP eCLIP16.19■□□□□ 0.184e-7■■■■■ 133.7
SMARCD1-202ENST00000394963 ITGB6P18564 788 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 MPP1Q00013 466 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 CDH17Q12864 832 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 USP4Q13107 963 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 ALFQ53S48 1182 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 RTP2Q5QGT7 225 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 DCAKDQ8WVC6 231 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 ALKBH8Q96BT7 664 aaKnown RBP16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 MARK4Q96L34 752 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 APOBEC2Q9Y235 224 aaKnown RBP16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 MEI4A8MW99 385 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 ABHD2P08910 425 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 CASP2P42575 452 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 ADGRD1Q6QNK2 874 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 PARP9Q8IXQ6 854 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 DDI1Q8WTU0 396 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 HMCESQ96FZ2 354 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 TTPALQ9BTX7 342 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 UXTQ9UBK9 157 aaPredicted RBP16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 SLC2A6Q9UGQ3 507 aa16.19■□□□□ 0.18
SMARCD1-202ENST00000394963 ARVCFO00192 962 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 DPYSL4O14531 572 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 MYL4P12829 197 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 NME5P56597 212 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 SLC10A7Q0GE19 358 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 POM121L1PQ3SYA9 428 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 C6orf163Q5TEZ5 329 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 PACS1Q6VY07 963 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 MON1AQ86VX9 555 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 CACUL1Q86Y37 369 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 KIRREL3Q8IZU9 778 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 PRKAG2Q9UGJ0 569 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 MTO1Q9Y2Z2 717 aaKnown RBP16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 B2RBV5 119 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 PGAM1P18669 254 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 WASHC5Q12768 1159 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 TXLNGQ9NUQ3 528 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 AFF4Q9UHB7 1163 aaKnown RBP16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 TYW5A2RUC4 315 aaKnown RBP16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 CABYRO75952 493 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 ASMTLO95671 621 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 STAU1O95793 577 aaKnown RBP16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 TCN1P20061 433 aaPredicted RBP16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 PDK4Q16654 411 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 SIGLEC10Q96LC7 697 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 WDR83Q9BRX9 315 aaKnown RBP16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 THTPAQ9BU02 230 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 ATP13A1Q9HD20 1204 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 VPS28Q9UK41 221 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 FAM50BQ9Y247 325 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 PCDHA11Q9Y5I1 949 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 LOXHD1Q8IVV2 1947 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 PAPPA2Q9BXP8 1791 aa16.18■□□□□ 0.18
SMARCD1-202ENST00000394963 IRAK2O43187 625 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 GCATO75600 419 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 ACVRL1P37023 503 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 GP5P40197 560 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 RASSF2P50749 326 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 WNT3AP56704 352 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 KCTD4Q8WVF5 259 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 SUSD3Q96L08 255 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 APOL5Q9BWW9 433 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 C5orf60A6NFR6 353 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 ENPP3O14638 875 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 GABRDO14764 452 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 PAMP19021 973 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 NAGLUP54802 743 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 ANKRD20A4Q4UJ75 823 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 C10orf107Q8IVU9 208 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 RNF148Q8N7C7 305 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms