RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 KCTD13Q8WZ19 329 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 PANX3Q96QZ0 392 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 SENP6Q9GZR1 1112 aaPredicted RBP14□□□□□ -0.17
CCDC142-202ENST00000393965 SFMBT1Q9UHJ3 866 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 ZNF180Q9UJW8 692 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 B3GAT3O94766 335 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 MYCP01106 439 aaPredicted RBP14□□□□□ -0.17
CCDC142-202ENST00000393965 THPOP40225 353 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 TPI1P60174 286 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 IRF9Q00978 393 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 WASHC2DQ5SRD0 308 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 LRRC8BQ6P9F7 803 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 SAPCD2Q86UD0 394 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 DDX18Q9NVP1 670 aaKnown RBP14□□□□□ -0.17
CCDC142-202ENST00000393965 RPS6KL1Q9Y6S9 549 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 SDR42E2A6NKP2 422 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 ZNF487B1APH4 448 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 LRIG2O94898 1065 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 IGHA2P01877 340 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 LTFP02788 710 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 ANPEPP15144 967 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 SCNN1AP37088 669 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 IRX1P78414 480 aaPredicted RBP14□□□□□ -0.17
CCDC142-202ENST00000393965 PAOXQ6QHF9 649 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 IFNL1Q8IU54 200 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 RNF135Q8IUD6 432 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 SPATA22Q8NHS9 363 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 ZSCAN18Q8TBC5 510 aaPredicted RBP14□□□□□ -0.17
CCDC142-202ENST00000393965 PTCD3Q96EY7 689 aaKnown RBP14□□□□□ -0.17
CCDC142-202ENST00000393965 APOBEC2Q9Y235 224 aaKnown RBP14□□□□□ -0.17
CCDC142-202ENST00000393965 NLRC5Q86WI3 1866 aa14□□□□□ -0.17
CCDC142-202ENST00000393965 NYNRINQ9P2P1 1898 aaKnown RBP13.99□□□□□ -0.17
CCDC142-202ENST00000393965 NFKB1P19838 968 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 GLUD2P49448 558 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 PAFAH1B3Q15102 231 aaKnown RBP13.99□□□□□ -0.17
CCDC142-202ENST00000393965 LGSNQ5TDP6 509 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 LAYNQ6UX15 382 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 ARHGAP24Q8N264 748 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 FAM136AQ96C01 138 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 SCYL1Q96KG9 808 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 ZNF184Q99676 751 aaPredicted RBP13.99□□□□□ -0.17
CCDC142-202ENST00000393965 APBA2Q99767 749 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 COLEC11Q9BWP8 271 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 WDR55Q9H6Y2 383 aaPredicted RBP13.99□□□□□ -0.17
CCDC142-202ENST00000393965 XAB2Q9HCS7 855 aaKnown RBP13.99□□□□□ -0.17
CCDC142-202ENST00000393965 CHRAC1Q9NRG0 131 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 TRMT13Q9NUP7 481 aaKnown RBP13.99□□□□□ -0.17
CCDC142-202ENST00000393965 IRAK4Q9NWZ3 460 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 TMEM216Q9P0N5 145 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 OR12D3Q9UGF7 316 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 FBXW11Q9UKB1 542 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 PADI3Q9ULW8 664 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 STAP1Q9ULZ2 295 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 TRPV2Q9Y5S1 764 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 ENO3P13929 434 aaPredicted RBP13.99□□□□□ -0.17
CCDC142-202ENST00000393965 PEX2P28328 305 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 RGS2P41220 211 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 OCRLQ01968 901 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 RAB41Q5JT25 222 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 STEAP4Q687X5 459 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 LRRC42Q9Y546 428 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 KRT38O76015 456 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 CALRP27797 417 aaKnown RBP13.99□□□□□ -0.17
CCDC142-202ENST00000393965 SKIV2L2P42285 1042 aaKnown RBP13.99□□□□□ -0.17
CCDC142-202ENST00000393965 CYTH1Q15438 398 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 RGMBQ6NW40 437 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 ZNF669Q96BR6 464 aaPredicted RBP13.99□□□□□ -0.17
CCDC142-202ENST00000393965 SIRPGQ9P1W8 387 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 LRCH1Q9Y2L9 728 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 PTPRDP23468 1912 aa13.99□□□□□ -0.17
CCDC142-202ENST00000393965 ALDH1A2O94788 518 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 MT-CYBP00156 380 aaPredicted RBP13.98□□□□□ -0.17
CCDC142-202ENST00000393965 BPGMP07738 259 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 ITGA2BP08514 1039 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 AKR1A1P14550 325 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 CCND3P30281 292 aaPredicted RBP13.98□□□□□ -0.17
CCDC142-202ENST00000393965 GPR15P49685 360 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 PCBP1Q15365 356 aaKnown RBP eCLIP13.98□□□□□ -0.17
CCDC142-202ENST00000393965 ATG16L1Q676U5 607 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 C10orf107Q8IVU9 208 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 WDR75Q8IWA0 830 aaKnown RBP13.98□□□□□ -0.17
CCDC142-202ENST00000393965 CCNYL1Q8N7R7 359 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 LRRC39Q96DD0 335 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 SH3GL3Q99963 347 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 WWP1Q9H0M0 922 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 ELNP15502 786 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 AP2B1P63010 937 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 MMEL1Q495T6 779 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 PHTF2Q8N3S3 785 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 GPR152Q8TDT2 470 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 CNBD2Q96M20 576 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 WDCPQ9H6R7 721 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 ANKRD12Q6UB98 2062 aa13.98□□□□□ -0.17
CCDC142-202ENST00000393965 CAPN8A6NHC0 703 aa13.97□□□□□ -0.17
CCDC142-202ENST00000393965 UNCXA6NJT0 531 aa13.97□□□□□ -0.17
CCDC142-202ENST00000393965 HSPA4LO95757 839 aa13.97□□□□□ -0.17
CCDC142-202ENST00000393965 JCHAINP01591 159 aa13.97□□□□□ -0.17
CCDC142-202ENST00000393965 FGFR3P22607 806 aa13.97□□□□□ -0.17
CCDC142-202ENST00000393965 MGAT3Q09327 533 aa13.97□□□□□ -0.17
CCDC142-202ENST00000393965 GRIK3Q13003 919 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms