RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 GRK2P25098 689 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 SLC34A1Q06495 639 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 NSUN2Q08J23 767 aaKnown RBP eCLIP10.73□□□□□ -0.69
CALD1-203ENST00000393118 C10orf120Q5SQS8 335 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 CDHR3Q6ZTQ4 885 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 DEFB107AQ8IZN7 70 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 ICA1LQ8NDH6 482 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 URGCPQ8TCY9 931 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 PCED1BQ96HM7 432 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 RPRD1AQ96P16 312 aaPredicted RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 DRC3Q9H069 523 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 MORF4L1Q9UBU8 362 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 LRRC37AA6NMS7 1700 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 PABPN1LA6NDY0 278 aaKnown RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 ABLIM1O14639 778 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 MSI1O43347 362 aaKnown RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 DAB1O75553 588 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 GCATO75600 419 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 ANXA9O76027 345 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 S100BP04271 92 aaPredicted RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 SOX11P35716 441 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 GABRB2P47870 512 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 NAGLUP54802 743 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 YWHAHQ04917 246 aaPredicted RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 CSHL1Q14406 222 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 WASHC2DQ5SRD0 308 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 VWA5B1Q5TIE3 1220 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 NCBP2-AS2Q69YL0 99 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 LRRC8BQ6P9F7 803 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 LINC00523Q86TU6 105 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 CAND1Q86VP6 1230 aaKnown RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 TDRD5Q8NAT2 981 aaKnown RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 ZNF398Q8TD17 642 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 SPATA17Q96L03 361 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 ZNF184Q99676 751 aaPredicted RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 CPNE1Q99829 537 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 CHRAC1Q9NRG0 131 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 SNX15Q9NRS6 342 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 PIGVQ9NUD9 493 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 TMCO1Q9UM00 188 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 NCAM2O15394 837 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 KDM1AO60341 852 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 TKTP29401 623 aaKnown RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 SLC10A2Q12908 348 aaPredicted RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 CTBP1Q13363 440 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 LBRQ14739 615 aaKnown RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 SPANXN3Q5MJ09 141 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 ARHGAP17Q68EM7 881 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 ZNF470Q6ECI4 717 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 RFWD3Q6PCD5 774 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 OTOP3Q7RTS5 596 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 PTAR1Q7Z6K3 402 aaPredicted RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 RAB44Q7Z6P3 723 aaPredicted RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 CHSY1Q86X52 802 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 CCDC117Q8IWD4 279 aaPredicted RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 BLOC1S5Q8TDH9 187 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 TRIM62Q9BVG3 475 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 COLEC11Q9BWP8 271 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 NUF2Q9BZD4 464 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 NMRAL1Q9HBL8 299 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 PALMDQ9NP74 551 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 TDRKHQ9Y2W6 561 aaKnown RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 ACOT9Q9Y305 439 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 AAR2Q9Y312 384 aaKnown RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 TRPV2Q9Y5S1 764 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 GLTPD2A6NH11 291 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 TP73O15350 636 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 TRIM13O60858 407 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 OR4Q2P0C623 313 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 STMN1P16949 149 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 TPSB2P20231 275 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 CCR1P32246 355 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 MRPS6P82932 125 aaKnown RBP10.72□□□□□ -0.69
CALD1-203ENST00000393118 TPSAB1Q15661 275 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 DLG2Q15700 870 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 GRTP1Q5TC63 336 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 KRT80Q6KB66 452 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 TRNP1Q6NT89 227 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 OSTM1Q86WC4 334 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.72□□□□□ -0.69
CALD1-203ENST00000393118 BHMTQ93088 406 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 OMDQ99983 421 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 MTG1Q9BT17 334 aaPredicted RBP10.72□□□□□ -0.69
CALD1-203ENST00000393118 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.72□□□□□ -0.69
CALD1-203ENST00000393118 EPS15L1Q9UBC2 864 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 CITO14578 2027 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 EVPLQ92817 2033 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 GOLGA8CPA6NN73 597 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 GSC2O15499 205 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 BUD23O43709 281 aaKnown RBP10.72□□□□□ -0.69
CALD1-203ENST00000393118 GCAP28676 217 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 HOXA11P31270 313 aaPredicted RBP10.72□□□□□ -0.69
CALD1-203ENST00000393118 SOX4Q06945 474 aaPredicted RBP10.72□□□□□ -0.69
CALD1-203ENST00000393118 CCDC15Q0P6D6 951 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 TMCO5AQ8N6Q1 288 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 TOP6BLQ8N6T0 577 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 SPATA22Q8NHS9 363 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 GPR152Q8TDT2 470 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 DENND1AQ8TEH3 1009 aa10.72□□□□□ -0.69
CALD1-203ENST00000393118 PHF21BQ96EK2 531 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms