RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 TDRD15B5MCY1 1934 aaKnown RBP21.98■■□□□ 1.11
TRIM54-202ENST00000380075 FAM237BA0A1B0GVD1 139 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 UPP2O95045 317 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 ALDOAP04075 364 aaKnown RBP21.98■■□□□ 1.11
TRIM54-202ENST00000380075 HOXC13P31276 330 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 CD68P34810 354 aaPredicted RBP21.98■■□□□ 1.11
TRIM54-202ENST00000380075 NAPEPLDQ6IQ20 393 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 LINC00523Q86TU6 105 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 UNC5BQ8IZJ1 945 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 CRIPAKQ8N1N5 446 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 DNAAF3Q8N9W5 541 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 ISL2Q96A47 359 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 PPP1R2P1Q96PQ5 205 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 SIKE1Q9BRV8 207 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 IL22Q9GZX6 179 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 MTIF3Q9H2K0 278 aaKnown RBP21.98■■□□□ 1.11
TRIM54-202ENST00000380075 SMOC2Q9H3U7 446 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 RPL26L1Q9UNX3 145 aaKnown RBP21.98■■□□□ 1.11
TRIM54-202ENST00000380075 STK38LQ9Y2H1 464 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 SNNO75324 88 aaPredicted RBP21.98■■□□□ 1.11
TRIM54-202ENST00000380075 EOMESO95936 686 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 CCNCP24863 283 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 PTPN4P29074 926 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 PDE1BQ01064 536 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 YWHAHQ04917 246 aaPredicted RBP21.98■■□□□ 1.11
TRIM54-202ENST00000380075 ZBTB16Q05516 673 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 KRT72Q14CN4 511 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 BTBD8Q5XKL5 378 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 CRLF3Q8IUI8 442 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 TOP1MTQ969P6 601 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 SLC7A6OSQ96CW6 309 aaPredicted RBP21.98■■□□□ 1.11
TRIM54-202ENST00000380075 AGAP3Q96P47 875 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 MECRQ9BV79 373 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 CATSPERBQ9H7T0 1116 aa21.98■■□□□ 1.11
TRIM54-202ENST00000380075 PIH1D1Q9NWS0 290 aaKnown RBP21.98■■□□□ 1.11
TRIM54-202ENST00000380075 PATJQ8NI35 1801 aa21.97■■□□□ 1.11
TRIM54-202ENST00000380075 ARHGAP42A6NI28 874 aa21.97■■□□□ 1.11
TRIM54-202ENST00000380075 TPP1O14773 563 aa21.97■■□□□ 1.11
TRIM54-202ENST00000380075 CACNG3O60359 315 aa21.97■■□□□ 1.11
TRIM54-202ENST00000380075 CCR1P32246 355 aa21.97■■□□□ 1.11
TRIM54-202ENST00000380075 SPRP35270 261 aaPredicted RBP21.97■■□□□ 1.11
TRIM54-202ENST00000380075 SLC5A3P53794 718 aa21.97■■□□□ 1.11
TRIM54-202ENST00000380075 ZBTB17Q13105 803 aa21.97■■□□□ 1.11
TRIM54-202ENST00000380075 FAM117BQ6P1L5 589 aa21.97■■□□□ 1.11
TRIM54-202ENST00000380075 TDHQ8IZJ6 230 aa21.97■■□□□ 1.11
TRIM54-202ENST00000380075 HASPINQ8TF76 798 aa21.97■■□□□ 1.11
TRIM54-202ENST00000380075 THAP1Q9NVV9 213 aa21.97■■□□□ 1.11
TRIM54-202ENST00000380075 TMEM189-UBE2V1I3L0A0 370 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 NFKB1P19838 968 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 PPP2R5DQ14738 602 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 GLB1LQ6UWU2 654 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 ZNF669Q96BR6 464 aaPredicted RBP21.96■■□□□ 1.11
TRIM54-202ENST00000380075 TMEM209Q96SK2 561 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 MLPHQ9BV36 600 aaPredicted RBP21.96■■□□□ 1.11
TRIM54-202ENST00000380075 TLE6Q9H808 572 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 COLQQ9Y215 455 aaPredicted RBP21.96■■□□□ 1.11
TRIM54-202ENST00000380075 PCDHB7Q9Y5E2 793 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 SNX10Q9Y5X0 201 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 ZNF638Q14966 1978 aaKnown RBP21.96■■□□□ 1.11
TRIM54-202ENST00000380075 TNFRSF10BO14763 440 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 CBX6O95503 412 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 MYL2P10916 166 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 CCND1P24385 295 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 MAGEA12P43365 314 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 STX3Q13277 289 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 PDE1CQ14123 709 aaPredicted RBP21.96■■□□□ 1.11
TRIM54-202ENST00000380075 ANKRD20A4Q4UJ75 823 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 WLSQ5T9L3 541 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 PRPF38BQ5VTL8 546 aaKnown RBP21.96■■□□□ 1.11
TRIM54-202ENST00000380075 FAM109BQ6ICB4 259 aaPredicted RBP21.96■■□□□ 1.11
TRIM54-202ENST00000380075 ZSCAN18Q8TBC5 510 aaPredicted RBP21.96■■□□□ 1.11
TRIM54-202ENST00000380075 RBBP8Q99708 897 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 WWP1Q9H0M0 922 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 NEU3Q9UQ49 428 aa21.96■■□□□ 1.11
TRIM54-202ENST00000380075 AAR2Q9Y312 384 aaKnown RBP21.96■■□□□ 1.11
TRIM54-202ENST00000380075 MICAL3Q7RTP6 2002 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 PLIN3O60664 434 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 SRGAP2BP0DMP2 458 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 ERVK-10P10266 1014 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 EZRP15311 586 aaKnown RBP21.95■■□□□ 1.1
TRIM54-202ENST00000380075 SERPINB3P29508 390 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 GRIK1P39086 918 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 CSE1LP55060 971 aaKnown RBP21.95■■□□□ 1.1
TRIM54-202ENST00000380075 NRG1Q02297 640 aaPredicted RBP21.95■■□□□ 1.1
TRIM54-202ENST00000380075 CDH17Q12864 832 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 N4BP2L1Q5TBK1 243 aaPredicted RBP21.95■■□□□ 1.1
TRIM54-202ENST00000380075 MANEALQ5VSG8 457 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 LRRC49Q8IUZ0 686 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 DCP1BQ8IZD4 617 aaKnown RBP21.95■■□□□ 1.1
TRIM54-202ENST00000380075 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.95■■□□□ 1.1
TRIM54-202ENST00000380075 SCAMP5Q8TAC9 235 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 TBC1D31Q96DN5 1066 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 FCRL3Q96P31 734 aaPredicted RBP21.95■■□□□ 1.1
TRIM54-202ENST00000380075 TMEM161AQ9NX61 479 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 NSMCE4AQ9NXX6 385 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 LRFN2Q9ULH4 789 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 SOX13Q9UN79 622 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 PSAT1Q9Y617 370 aa21.95■■□□□ 1.1
TRIM54-202ENST00000380075 ZCWPW2A0A1B0GU75 182 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 GRXCR1A8MXD5 290 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms