RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 ZNF600Q6ZNG1 722 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 SIX6OS1Q8N1H7 587 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 TMEM102Q8N9M5 508 aaPredicted RBP7.62□□□□□ -1.19
CDKL5-201ENST00000379989 CHST13Q8NET6 341 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 DNERQ8NFT8 737 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 OR5H6Q8NGV6 325 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 BCL7CQ8WUZ0 217 aaPredicted RBP7.62□□□□□ -1.19
CDKL5-201ENST00000379989 ATG4AQ8WYN0 398 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 TOE1Q96GM8 510 aaKnown RBP7.62□□□□□ -1.19
CDKL5-201ENST00000379989 SGIP1Q9BQI5 828 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 ACAT2Q9BWD1 397 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 C1QTNF7Q9BXJ2 289 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 ATP13A3Q9H7F0 1226 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 SAYSD1Q9NPB0 183 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 ZNF277Q9NRM2 450 aaPredicted RBP7.62□□□□□ -1.19
CDKL5-201ENST00000379989 TAS2R14Q9NYV8 317 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 CNTN3Q9P232 1028 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 PACSIN3Q9UKS6 424 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 CNOT11Q9UKZ1 510 aaKnown RBP7.62□□□□□ -1.19
CDKL5-201ENST00000379989 STRIP2Q9ULQ0 834 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 EIF3LQ9Y262 564 aaKnown RBP7.62□□□□□ -1.19
CDKL5-201ENST00000379989 TESMINQ9Y4I5 508 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 PCDHGB3Q9Y5G1 929 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 SDR42E2A6NKP2 422 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 RAD17O75943 681 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 GARTP22102 1010 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 ARNTP27540 789 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 SERPINB1P30740 379 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 RRM2P31350 389 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 SSTR3P32745 418 aaPredicted RBP7.62□□□□□ -1.19
CDKL5-201ENST00000379989 TTKP33981 857 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 CASP3P42574 277 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 ECE1P42892 770 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 CDK10Q15131 360 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 C6orf10Q5SRN2 563 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 LBX2Q6XYB7 198 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 PRR23BQ6ZRT6 265 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 DYMQ7RTS9 669 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 ANKS1BQ7Z6G8 1248 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 CPNE8Q86YQ8 564 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 IFNL1Q8IU54 200 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 MZB1Q8WU39 189 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 CDKL2Q92772 493 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 SLC39A13Q96H72 371 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 HEMGNQ9BXL5 484 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 AKIP1Q9NQ31 210 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 TMEM9Q9P0T7 183 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 MARCOQ9UEW3 520 aaPredicted RBP7.62□□□□□ -1.19
CDKL5-201ENST00000379989 ENPP5Q9UJA9 477 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 SCAF8Q9UPN6 1271 aaKnown RBP7.62□□□□□ -1.19
CDKL5-201ENST00000379989 PAPPA2Q9BXP8 1791 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 A0A0G2JMP0 313 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 A0A0X1KG70 313 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 PRSS51A0A1B0GVH4 220 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 KITP10721 976 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 APLP1P51693 650 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 BACE1P56817 501 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 LAPTM5Q13571 262 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 PPP2R5DQ14738 602 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 SNX17Q15036 470 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 CLEC16AQ2KHT3 1053 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 MGAT5BQ3V5L5 792 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 CES4AQ5XG92 561 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 C11orf63Q6NUN7 778 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 FKBP9P1Q75LS8 142 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 ANKRD53Q8N9V6 530 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 FAM47BQ8NA70 645 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 OR10Z1Q8NGY1 313 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 TRIM63Q969Q1 353 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 RILPQ96NA2 401 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 FAM111AQ96PZ2 611 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 SNX18Q96RF0 628 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 KCNN2Q9H2S1 579 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 CPVLQ9H3G5 476 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 ZNF395Q9H8N7 513 aaPredicted RBP7.62□□□□□ -1.19
CDKL5-201ENST00000379989 TCF7L2Q9NQB0 619 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 SUCOQ9UBS9 1254 aaKnown RBP7.62□□□□□ -1.19
CDKL5-201ENST00000379989 SLC24A2Q9UI40 661 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 ITGA11Q9UKX5 1188 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 PTPRFP10586 1907 aa7.62□□□□□ -1.19
CDKL5-201ENST00000379989 MYH9P35579 1960 aaKnown RBP7.62□□□□□ -1.19
CDKL5-201ENST00000379989 RNF103O00237 685 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 AREL1O15033 823 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 CLDN3O15551 220 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 FAM13AO94988 1023 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 BTF3P20290 206 aaKnown RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 COMTP21964 271 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 CCND2P30279 289 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 CETN1Q12798 172 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 GRSF1Q12849 480 aaKnown RBP eCLIP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 RSBN1Q5VWQ0 802 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 IZUMO3Q5VZ72 239 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 ATG16L1Q676U5 607 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 IQSEC1Q6DN90 963 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 GJB7Q6PEY0 223 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 C1orf186Q6ZWK4 172 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 METTL3Q86U44 580 aaKnown RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 PDPRQ8NCN5 879 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 SIMC1Q8NDZ2 872 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms