RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 FOXB2Q5VYV0 432 aa11.15□□□□□ -0.62
BEST1-201ENST00000378043 OLFML2BQ68BL8 750 aa11.15□□□□□ -0.62
BEST1-201ENST00000378043 AAGABQ6PD74 315 aa11.15□□□□□ -0.62
BEST1-201ENST00000378043 ADGRG6Q86SQ4 1221 aa11.15□□□□□ -0.62
BEST1-201ENST00000378043 KCNMB4Q86W47 210 aa11.15□□□□□ -0.62
BEST1-201ENST00000378043 EFCAB3Q8N7B9 438 aa11.15□□□□□ -0.62
BEST1-201ENST00000378043 PGAP3Q96FM1 320 aaPredicted RBP11.15□□□□□ -0.62
BEST1-201ENST00000378043 VPS39Q96JC1 886 aa11.15□□□□□ -0.62
BEST1-201ENST00000378043 OR52B2Q96RD2 323 aa11.15□□□□□ -0.62
BEST1-201ENST00000378043 FAM96AQ9H5X1 160 aa11.15□□□□□ -0.62
BEST1-201ENST00000378043 CYP4F11Q9HBI6 524 aa11.15□□□□□ -0.62
BEST1-201ENST00000378043 DDIT4Q9NX09 232 aa11.15□□□□□ -0.62
BEST1-201ENST00000378043 CPSF2Q9P2I0 782 aaKnown RBP11.15□□□□□ -0.62
BEST1-201ENST00000378043 TIMM13Q9Y5L4 95 aaPredicted RBP11.15□□□□□ -0.62
BEST1-201ENST00000378043 MYLKQ15746 1914 aa11.15□□□□□ -0.62
BEST1-201ENST00000378043 HHLA1C9JL84 531 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 E9PBE3 544 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 HAS3O00219 553 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 NCAM2O15394 837 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 KLHL41O60662 606 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 CHRNGP07510 517 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 NUMBP49757 651 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 MPP3Q13368 585 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 FAM35AQ86V20 835 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 HPS6Q86YV9 775 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 DEFB107AQ8IZN7 70 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 CNTD1Q8N815 330 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 AGR3Q8TD06 166 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 EDEM1Q92611 657 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 CCDC124Q96CT7 223 aaKnown RBP11.15□□□□□ -0.63
BEST1-201ENST00000378043 CMTM5Q96DZ9 223 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 SENP8Q96LD8 212 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 GATA5Q9BWX5 397 aaPredicted RBP11.15□□□□□ -0.63
BEST1-201ENST00000378043 DNAI2Q9GZS0 605 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 TSPYL2Q9H2G4 693 aaPredicted RBP11.15□□□□□ -0.63
BEST1-201ENST00000378043 NMRAL1Q9HBL8 299 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 C20orf96Q9NUD7 363 aaPredicted RBP11.15□□□□□ -0.63
BEST1-201ENST00000378043 POMPQ9Y244 141 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 SLC45A1Q9Y2W3 748 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 RAD54BQ9Y620 910 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 CDY2AQ9Y6F7 541 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 CDY1Q9Y6F8 540 aa11.15□□□□□ -0.63
BEST1-201ENST00000378043 ERI2A8K979 691 aaKnown RBP11.14□□□□□ -0.63
BEST1-201ENST00000378043 TRIM13O60858 407 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 AP1G2O75843 785 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 LRIG2O94898 1065 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 FBXO21O94952 628 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 HSPA4LO95757 839 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 MPOP05164 745 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 GLDCP23378 1020 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 CCR10P46092 362 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 DSG1Q02413 1049 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 KLF10Q13118 480 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 ZRSR2Q15696 482 aaKnown RBP11.14□□□□□ -0.63
BEST1-201ENST00000378043 PDZD4Q76G19 769 aaPredicted RBP11.14□□□□□ -0.63
BEST1-201ENST00000378043 C3orf58Q8NDZ4 430 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 ZNF419Q96HQ0 510 aaPredicted RBP11.14□□□□□ -0.63
BEST1-201ENST00000378043 TEKT5Q96M29 485 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 C1QTNF1Q9BXJ1 281 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 RHOBTB2Q9BYZ6 727 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 PIDD1Q9HB75 910 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 CNGB3Q9NQW8 809 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 IARS2Q9NSE4 1012 aaKnown RBP11.14□□□□□ -0.63
BEST1-201ENST00000378043 OXSMQ9NWU1 459 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 OR12D3Q9UGF7 316 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 SCOCQ9UIL1 159 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 ADAMTS6Q9UKP5 1117 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 CCDC78A2IDD5 438 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 MAGEA13PA6NCF6 341 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 TK2O00142 265 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 JCHAINP01591 159 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 COX4I1P13073 169 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 YBX3P16989 372 aaKnown RBP eCLIP11.14□□□□□ -0.63
BEST1-201ENST00000378043 GABRB3P28472 473 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 CRYBB1P53674 252 aaPredicted RBP11.14□□□□□ -0.63
BEST1-201ENST00000378043 GRM3Q14832 879 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 C9orf131Q5VYM1 1079 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 TWF2Q6IBS0 349 aaKnown RBP11.14□□□□□ -0.63
BEST1-201ENST00000378043 OTOP3Q7RTS5 596 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 PLEKHH3Q7Z736 793 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 DHDDSQ86SQ9 333 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 DDX50Q9BQ39 737 aaKnown RBP11.14□□□□□ -0.63
BEST1-201ENST00000378043 IL22Q9GZX6 179 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 VCXQ9H320 206 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 TRHDEQ9UKU6 1024 aa11.14□□□□□ -0.63
BEST1-201ENST00000378043 TTC3P53804 2025 aa11.13□□□□□ -0.63
BEST1-201ENST00000378043 ENO4A6NNW6 628 aa11.13□□□□□ -0.63
BEST1-201ENST00000378043 UBTFL6P0CB48 400 aaPredicted RBP11.13□□□□□ -0.63
BEST1-201ENST00000378043 NPY2RP49146 381 aa11.13□□□□□ -0.63
BEST1-201ENST00000378043 CXCR3P49682 368 aa11.13□□□□□ -0.63
BEST1-201ENST00000378043 PSEN2P49810 448 aa11.13□□□□□ -0.63
BEST1-201ENST00000378043 CSE1LP55060 971 aaKnown RBP11.13□□□□□ -0.63
BEST1-201ENST00000378043 GSTA3Q16772 222 aa11.13□□□□□ -0.63
BEST1-201ENST00000378043 INTS6LQ5JSJ4 861 aaKnown RBP11.13□□□□□ -0.63
BEST1-201ENST00000378043 TCHHL1Q5QJ38 904 aaPredicted RBP11.13□□□□□ -0.63
BEST1-201ENST00000378043 NAIF1Q69YI7 327 aaPredicted RBP11.13□□□□□ -0.63
BEST1-201ENST00000378043 TLK2Q86UE8 772 aa11.13□□□□□ -0.63
BEST1-201ENST00000378043 ZC3HC1Q86WB0 502 aaKnown RBP11.13□□□□□ -0.63
BEST1-201ENST00000378043 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.13□□□□□ -0.63
BEST1-201ENST00000378043 TDRD5Q8NAT2 981 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms