RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 CES3Q6UWW8 571 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 TMEM126BQ8IUX1 230 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 UNC5BQ8IZJ1 945 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 UBR7Q8N806 425 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 OR52K1Q8NGK4 314 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 SLC35B2Q8TB61 432 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 APOL4Q9BPW4 351 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 WDR12Q9GZL7 423 aaKnown RBP8.91□□□□□ -0.98
PCDH9-202ENST00000377865 TRIM45Q9H8W5 580 aaPredicted RBP8.91□□□□□ -0.98
PCDH9-202ENST00000377865 EIF2B3Q9NR50 452 aaKnown RBP8.91□□□□□ -0.98
PCDH9-202ENST00000377865 ARHGAP28Q9P2N2 729 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 PCDHB12Q9Y5F1 795 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 SLC30A1Q9Y6M5 507 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 FKBP9O95302 570 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 MSH3P20585 1137 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 ZYG11AQ6WRX3 759 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 FKBP9P1Q75LS8 142 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 PROSER1Q86XN7 944 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 SLC41A1Q8IVJ1 513 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 RORBQ92753 470 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 SKA1Q96BD8 255 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 HOPXQ9BPY8 73 aaPredicted RBP8.91□□□□□ -0.98
PCDH9-202ENST00000377865 APOL2Q9BQE5 337 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 PKP3Q9Y446 797 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 CCDC88AQ3V6T2 1871 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 RGPD5Q99666 1765 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 C2orf81A6NN90 581 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 LBPP18428 481 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 AKT1P31749 480 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 NOS2P35228 1153 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 TKTL1P51854 596 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 TSTA3Q13630 321 aaPredicted RBP8.9□□□□□ -0.98
PCDH9-202ENST00000377865 CRY2Q49AN0 593 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 PTPN20Q4JDL3 420 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 PDSS2Q86YH6 399 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 SCUBE3Q8IX30 993 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 DEFB106AQ8N104 65 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 HSFY1Q96LI6 401 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 RAD21L1Q9H4I0 556 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 MID1IP1Q9NPA3 183 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 BAZ2AQ9UIF9 1905 aaKnown RBP8.9□□□□□ -0.98
PCDH9-202ENST00000377865 PDZK1P1A8MUH7 402 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 PEX1O43933 1283 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 FAM155BO75949 473 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 CRTAMO95727 393 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 HOXD13P35453 343 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 GRIA3P42263 894 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 PSEN1P49768 467 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 MTTPP55157 894 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 CAPSQ13938 189 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 INAQ16352 499 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 ZNF618Q5T7W0 954 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 ZNF470Q6ECI4 717 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 ZNF410Q86VK4 478 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 DCP1BQ8IZD4 617 aaKnown RBP8.9□□□□□ -0.98
PCDH9-202ENST00000377865 SFRP1Q8N474 314 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 LENG9Q96B70 501 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 RHOBTB2Q9BYZ6 727 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 POPDC2Q9HBU9 364 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 LRFN2Q9ULH4 789 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 TRIM24O15164 1050 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 CD3EAPO15446 510 aaKnown RBP8.9□□□□□ -0.98
PCDH9-202ENST00000377865 BAIAP3O94812 1187 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 HIST1H2AGP0C0S8 130 aaPredicted RBP8.9□□□□□ -0.98
PCDH9-202ENST00000377865 AOC1P19801 751 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 HIST1H2ADP20671 130 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 CYP2C18P33260 490 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 ADIGQ0VDE8 80 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 DPY19L2Q6NUT2 758 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 LLGL2Q6P1M3 1020 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 RHBDF2Q6PJF5 856 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 TAGAPQ8N103 731 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 IL31RAQ8NI17 732 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 GIPC3Q8TF64 312 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 COX4I2Q96KJ9 171 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 HIST1H2AHQ96KK5 128 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 HIST1H2AJQ99878 128 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 H2AFJQ9BTM1 129 aa8.9□□□□□ -0.98
PCDH9-202ENST00000377865 FAM32AQ9Y421 112 aaKnown RBP8.9□□□□□ -0.98
PCDH9-202ENST00000377865 CYB561D2O14569 222 aa8.9□□□□□ -0.99
PCDH9-202ENST00000377865 MDM4O15151 490 aa8.9□□□□□ -0.99
PCDH9-202ENST00000377865 PLIN3O60664 434 aa8.9□□□□□ -0.99
PCDH9-202ENST00000377865 FAM20BO75063 409 aa8.9□□□□□ -0.99
PCDH9-202ENST00000377865 HARS2P49590 506 aaKnown RBP8.9□□□□□ -0.99
PCDH9-202ENST00000377865 POU6F1Q14863 301 aa8.9□□□□□ -0.99
PCDH9-202ENST00000377865 TRIM60Q495X7 471 aa8.9□□□□□ -0.99
PCDH9-202ENST00000377865 ZNF276Q8N554 614 aa8.9□□□□□ -0.99
PCDH9-202ENST00000377865 OR56A4Q8NGH8 313 aa8.9□□□□□ -0.99
PCDH9-202ENST00000377865 ITFG1Q8TB96 612 aa8.9□□□□□ -0.99
PCDH9-202ENST00000377865 TUBGCP5Q96RT8 1024 aa8.9□□□□□ -0.99
PCDH9-202ENST00000377865 CEP41Q9BYV8 373 aa8.9□□□□□ -0.99
PCDH9-202ENST00000377865 GPR88Q9GZN0 384 aa8.9□□□□□ -0.99
PCDH9-202ENST00000377865 NWD2Q9ULI1 1742 aa8.9□□□□□ -0.99
PCDH9-202ENST00000377865 POMPQ9Y244 141 aa8.9□□□□□ -0.99
PCDH9-202ENST00000377865 PLCH1Q4KWH8 1693 aa8.9□□□□□ -0.99
PCDH9-202ENST00000377865 KLHL33A6NCF5 533 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 TBKBP1A7MCY6 615 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 SPATA31C2B4DYI2 1134 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 CCT8P50990 548 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 AMHR2Q16671 573 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms