RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 OR52K1Q8NGK4 314 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 DRC3Q9H069 523 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 ACAD9Q9H845 621 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 EIF2B3Q9NR50 452 aaKnown RBP16.81■□□□□ 0.28
TRIM39-201ENST00000376656 AP4S1Q9Y587 144 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 COPG1Q9Y678 874 aaKnown RBP16.81■□□□□ 0.28
TRIM39-201ENST00000376656 LCTP09848 1927 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 BOLA2-SMG1P6H3BVE0 249 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 ICAM3P32942 547 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 RANBP9Q96S59 729 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 ACE2Q9BYF1 805 aaPredicted RBP16.81■□□□□ 0.28
TRIM39-201ENST00000376656 TRPV6Q9H1D0 765 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 MINDY3Q9H8M7 445 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 FAIMQ9NVQ4 179 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 MAGED2Q9UNF1 606 aaPredicted RBP16.81■□□□□ 0.28
TRIM39-201ENST00000376656 CDYLQ9Y232 598 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 MYRFQ9Y2G1 1151 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 PCDHGA4Q9Y5G9 962 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 TRIM38O00635 465 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 TADA2AO75478 443 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 TOMM70O94826 608 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 MPOP05164 745 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 TRIM50Q86XT4 487 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 LRRC43Q8N309 656 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 BIRC8Q96P09 236 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 ZNF711Q9Y462 761 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 C9IYK1 514 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 SUPT3HO75486 399 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 PDGFRBP09619 1106 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 SBK3P0C264 359 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 NAGLUP54802 743 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 CBX3Q13185 183 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 MXD4Q14582 209 aaPredicted RBP16.8■□□□□ 0.28
TRIM39-201ENST00000376656 HERC3Q15034 1050 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 MTX3Q5HYI7 312 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 SMYD5Q6GMV2 418 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 KRT80Q6KB66 452 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 SMYD1Q8NB12 490 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 OSBPL11Q9BXB4 747 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 SNX9Q9Y5X1 595 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 RLFQ13129 1914 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 SLC22A2O15244 555 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 H2AFYO75367 372 aaKnown RBP16.8■□□□□ 0.28
TRIM39-201ENST00000376656 STAG3L1P0CL83 205 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 INCA1Q0VD86 236 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 DPYSQ14117 519 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 RFTN1Q14699 578 aaPredicted RBP16.8■□□□□ 0.28
TRIM39-201ENST00000376656 C16orf72Q14CZ0 275 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 TREML2Q5T2D2 321 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 GK5Q6ZS86 529 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 SLC7A14Q8TBB6 771 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 TRAPPC12Q8WVT3 735 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 RMND5BQ96G75 393 aaPredicted RBP16.8■□□□□ 0.28
TRIM39-201ENST00000376656 NT5C1AQ9BXI3 368 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 FZD8Q9H461 694 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 TASP1Q9H6P5 420 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 PPP1R1BQ9UD71 204 aaPredicted RBP16.8■□□□□ 0.28
TRIM39-201ENST00000376656 CROCCQ5TZA2 2017 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 IQCF3P0C7M6 154 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 VARSP26640 1264 aaKnown RBP16.8■□□□□ 0.28
TRIM39-201ENST00000376656 GLRBP48167 497 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 KIZQ2M2Z5 673 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 ITPRIPL1Q6GPH6 555 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 DHRS4L2Q6PKH6 230 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 Q6ZNX1 250 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 ZNF567Q8N184 647 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.8■□□□□ 0.28
TRIM39-201ENST00000376656 TEPSINQ96N21 525 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 CIB1Q99828 191 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 EBF1Q9UH73 591 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 SH3GLB1Q9Y371 365 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 SNX13Q9Y5W8 968 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 USP3Q9Y6I4 520 aa16.8■□□□□ 0.28
TRIM39-201ENST00000376656 SH3PXD2BA1X283 911 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 KCNU1A8MYU2 1149 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 SAT1P21673 171 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 ANKDD1AQ495B1 522 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 LIPMQ5VYY2 423 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 ELMSAN1Q6PJG2 1045 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 LSMEM2Q8N112 164 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 TMEM151AQ8N4L1 468 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 SLCO4A1Q96BD0 722 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 ASB9Q96DX5 294 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 C2orf40Q9H1Z8 148 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 PLGRKTQ9HBL7 147 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 PCDHGA7Q9Y5G6 932 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 COL4A5P29400 1685 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 TMEM233B4DJY2 109 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 E7ENX8 843 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 FOXD2O60548 495 aaPredicted RBP16.79■□□□□ 0.28
TRIM39-201ENST00000376656 ATICP31939 592 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 PSME3P61289 254 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 FAM160B1Q5W0V3 765 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 TMEM110Q86TL2 294 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 ACOT1Q86TX2 421 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 TP53INP2Q8IXH6 220 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 FIBCD1Q8N539 461 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 CNTD1Q8N815 330 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 CCNYQ8ND76 341 aa16.79■□□□□ 0.28
TRIM39-201ENST00000376656 LPIN3Q9BQK8 851 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms